RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CMKLR1Q99788 373 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 MACROD1Q9BQ69 325 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 SPRTNQ9H040 489 aaPredicted RBP16.71■□□□□ 0.27
CHGA-202ENST00000334654 CCDC134Q9H6E4 229 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 WASF3Q9UPY6 502 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 LOXL2Q9Y4K0 774 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 TRAF6Q9Y4K3 522 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 B4E171 279 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 TMEM150CB9EJG8 249 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 MAP3K7O43318 606 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 SNUPNO95149 360 aaKnown RBP16.7■□□□□ 0.26
CHGA-202ENST00000334654 UROSP10746 265 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 TSPAN7P41732 249 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 TUBB3Q13509 450 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 WASHC2DQ5SRD0 308 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 FRG2Q64ET8 278 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 TTC19Q6DKK2 380 aaPredicted RBP16.7■□□□□ 0.26
CHGA-202ENST00000334654 DGLUCYQ7Z3D6 616 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 CLYBLQ8N0X4 340 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 HUS1BQ8NHY5 278 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 AGR3Q8TD06 166 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 SLC13A3Q8WWT9 602 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 USP7Q93009 1102 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 UBE2E3Q969T4 207 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 PMEPA1Q969W9 287 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 MTFMTQ96DP5 389 aaKnown RBP16.7■□□□□ 0.26
CHGA-202ENST00000334654 FRG2BQ96QU4 278 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 MTERF1Q99551 399 aaKnown RBP16.7■□□□□ 0.26
CHGA-202ENST00000334654 ILKAPQ9H0C8 392 aaPredicted RBP16.7■□□□□ 0.26
CHGA-202ENST00000334654 TUBB1Q9H4B7 451 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 FBXO8Q9NRD0 319 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 STARD5Q9NSY2 213 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 PNPOQ9NVS9 261 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 DNAJC15Q9Y5T4 150 aa16.7■□□□□ 0.26
CHGA-202ENST00000334654 FER1L5A0AVI2 2057 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 SCN3AQ9NY46 2000 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 FITM1A5D6W6 292 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 MAGEB17A8MXT2 336 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 CLEC3AO75596 197 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 PDYNP01213 254 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 PCNAP12004 261 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 FGF5P12034 268 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 GSTM2P28161 218 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 PIK3CBP42338 1070 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 ID4P47928 161 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 CYP4F2P78329 520 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 FOXM1Q08050 763 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 ABRAXAS2Q15018 415 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 HKDC1Q2TB90 917 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 ASPGQ86U10 573 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 TBC1D19Q8N5T2 526 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 TRPV3Q8NET8 790 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 TTLQ8NG68 377 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 WDR36Q8NI36 951 aaKnown RBP16.69■□□□□ 0.26
CHGA-202ENST00000334654 NT5CQ8TCD5 201 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 SEC16BQ96JE7 1060 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 C7orf26Q96N11 449 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 SLC6A16Q9GZN6 736 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 SNX6Q9UNH7 406 aa16.69■□□□□ 0.26
CHGA-202ENST00000334654 SERTM1A2A2V5 107 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 ANKDD1BA6NHY2 528 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 FOXE1O00358 373 aaPredicted RBP16.68■□□□□ 0.26
CHGA-202ENST00000334654 PLD2O14939 933 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 MED26O95402 600 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 TIAF1O95411 115 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 ETHE1O95571 254 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 HMOX2P30519 316 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 RPL14P50914 215 aaKnown RBP16.68■□□□□ 0.26
CHGA-202ENST00000334654 EIF3IQ13347 325 aaKnown RBP16.68■□□□□ 0.26
CHGA-202ENST00000334654 CAMK2BQ13554 666 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 PWP1Q13610 501 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 IL11RAQ14626 422 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 ADPRMQ3LIE5 342 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 PRAMEF17Q5VTA0 474 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 SCIMPQ6UWF3 145 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 KCT2Q8NC54 265 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 REPS1Q96D71 796 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 HBEGFQ99075 208 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 MS4A8Q9BY19 250 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 KLHL31Q9H511 634 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 DMRT3Q9NQL9 472 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 PSD3Q9NYI0 1048 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 AKAP7Q9P0M2 348 aaPredicted RBP16.68■□□□□ 0.26
CHGA-202ENST00000334654 ADGRE2Q9UHX3 823 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 PPT2Q9UMR5 302 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 SATB2Q9UPW6 733 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 RUVBL1Q9Y265 456 aaKnown RBP16.68■□□□□ 0.26
CHGA-202ENST00000334654 FIS1Q9Y3D6 152 aa16.68■□□□□ 0.26
CHGA-202ENST00000334654 TCP11X1B4DZS4 312 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 C4orf51C9J302 202 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 ULK1O75385 1050 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 KRT6AP02538 564 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 KRT6BP04259 564 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 EIF2S1P05198 315 aaKnown RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 JUNP05412 331 aaKnown RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 SERPINA6P08185 405 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 SERPINB1P30740 379 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 KRT6CP48668 564 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 ITGA1P56199 1179 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms