RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ACPTQ9BZG2 426 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 SPRTNQ9H040 489 aaPredicted RBP15.78■□□□□ 0.12
SHOX-201ENST00000334060 PCBD2Q9H0N5 130 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 KCNK13Q9HB14 408 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 TMEM184CQ9NVA4 438 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 PDP2Q9P2J9 529 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 TRPS1Q9UHF7 1281 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 HAO1Q9UJM8 370 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 DCTN4Q9UJW0 460 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 PCDHGA4Q9Y5G9 962 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 H0YGG7 62 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 RPL14P50914 215 aaKnown RBP15.78■□□□□ 0.12
SHOX-201ENST00000334060 VSX2P58304 361 aaPredicted RBP15.78■□□□□ 0.12
SHOX-201ENST00000334060 ARF3P61204 181 aaPredicted RBP15.78■□□□□ 0.12
SHOX-201ENST00000334060 ABATP80404 500 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 PCDH1Q08174 1060 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 ASPHQ12797 758 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 SQSTM1Q13501 440 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 C11orf91Q3C1V1 193 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 METTL2BQ6P1Q9 378 aaKnown RBP15.78■□□□□ 0.12
SHOX-201ENST00000334060 Q6ZSR9 355 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 TMEM151BQ8IW70 566 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 RAB3IL1Q8TBN0 382 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 SLC41A2Q96JW4 573 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 ILKAPQ9H0C8 392 aaPredicted RBP15.78■□□□□ 0.12
SHOX-201ENST00000334060 CCL27Q9Y4X3 112 aa15.78■□□□□ 0.12
SHOX-201ENST00000334060 ARHGAP10A1A4S6 786 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 SLC30A4O14863 429 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 H2AFYO75367 372 aaKnown RBP15.77■□□□□ 0.12
SHOX-201ENST00000334060 GBAP04062 536 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 DRD4P21917 467 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 EPHA3P29320 983 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 ETV5P41161 510 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 MLLT3P42568 568 aaPredicted RBP15.77■□□□□ 0.12
SHOX-201ENST00000334060 PKNOX1P55347 436 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 TBCCQ15814 346 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 LIPJQ5W064 366 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 FRG2Q64ET8 278 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 RNF44Q7L0R7 432 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 PRSS42Q7Z5A4 293 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 GLRX5Q86SX6 157 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 LAS2Q8IYD9 372 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 OR1L3Q8NH93 324 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 KLHL6Q8WZ60 621 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 CCT6BQ92526 530 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 GRAMD1AQ96CP6 724 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 FRG2BQ96QU4 278 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 TRMOQ9BU70 441 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 ZNF768Q9H5H4 540 aaKnown RBP15.77■□□□□ 0.12
SHOX-201ENST00000334060 DLL3Q9NYJ7 618 aa15.77■□□□□ 0.12
SHOX-201ENST00000334060 SCN3AQ9NY46 2000 aa15.77■□□□□ 0.11
SHOX-201ENST00000334060 H3BMH7 237 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 MATN2O00339 956 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 NDUFS4O43181 175 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 DNAJC8O75937 253 aaPredicted RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 DKK1O94907 266 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 KCNK5O95279 499 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 NELFEP18615 380 aaKnown RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 HMOX2P30519 316 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 GALNT1Q10472 559 aaPredicted RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 GGTA1PQ4G0N0 100 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 CDCP2Q5VXM1 449 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 MED27Q6P2C8 311 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 DDIASQ8IXT1 998 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 ZCCHC10Q8TBK6 192 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 SELENOMQ8WWX9 145 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 SREK1Q8WXA9 508 aaKnown RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 USP7Q93009 1102 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 CHMP6Q96FZ7 201 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 MARK4Q96L34 752 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 OR52B2Q96RD2 323 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 F2RL3Q96RI0 385 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 ZFYVE21Q9BQ24 234 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 AIF1LQ9BQI0 150 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 EFCAB11Q9BUY7 163 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 MRPL1Q9BYD6 325 aaKnown RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 EHD1Q9H4M9 534 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 SEMA5BQ9P283 1151 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 SNX7Q9UNH6 387 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 KLK4Q9Y5K2 254 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 LAMA5O15230 3695 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 H0YIV9 168 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 CRCPO75575 148 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 ZBTB11O95625 1053 aaPredicted RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 FGF4P08620 206 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 UROSP10746 265 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 FOXL2P58012 376 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 RIPK1Q13546 671 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 TMEM198Q66K66 360 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 CYB5D1Q6P9G0 228 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 UBE3DQ7Z6J8 389 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 MCATQ8IVS2 390 aaKnown RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 TRIM42Q8IWZ5 723 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 CLYBLQ8N0X4 340 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 METTL27Q8N6F8 245 aaPredicted RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 PIWIL2Q8TC59 973 aaKnown RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 ANKRD27Q96NW4 1050 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 DMRT3Q9NQL9 472 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 SIDT1Q9NXL6 827 aaKnown RBP15.76■□□□□ 0.11
SHOX-201ENST00000334060 CDV3Q9UKY7 258 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms