RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RIPPLY2Q5TAB7 128 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 MARC1Q5VT66 337 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 MLIPQ5VWP3 458 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 FIGLAQ6QHK4 219 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TMEM178AQ8NBL3 297 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CCNYQ8ND76 341 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SLC7A5P2Q9GIP4 190 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 POLR1EQ9GZS1 481 aaKnown RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 C10orf88Q9H8K7 445 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RMI1Q9H9A7 625 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 POPDC3Q9HBV1 291 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 IFT80Q9P2H3 777 aaPredicted RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 EIF3LQ9Y262 564 aaKnown RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 PPIL1Q9Y3C6 166 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TCAF1Q9Y4C2 921 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RAI1Q7Z5J4 1906 aaPredicted RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 HYKKA2RU49 373 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 GMNCA6NCL1 334 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 H7C0S8 307 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TGDSO95455 350 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 IGSF6O95976 241 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 PYGLP06737 847 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SSTR1P30872 391 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 IDUAP35475 653 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 PRKAA2P54646 552 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 ABRQ12979 859 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 VEZF1Q14119 521 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 PDK4Q16654 411 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 UGP2Q16851 508 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 KBTBD12Q3ZCT8 623 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 ANKRD20A4Q4UJ75 823 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RIPOR1Q6ZS17 1223 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 DPPA4Q7L190 304 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TRIM48Q8IWZ4 208 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 HOMEZQ8IX15 550 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CYP4X1Q8N118 509 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RSC1A1Q92681 617 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CERS2Q96G23 380 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 DACH2Q96NX9 599 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 PKP2Q99959 881 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SIKE1Q9BRV8 207 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TRABDQ9H4I3 376 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 VPS37BQ9H9H4 285 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TBC1D29Q9UFV1 150 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 NXT1Q9UKK6 140 aaKnown RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CHMP2BQ9UQN3 213 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 AP1M2Q9Y6Q5 423 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 FZD6O60353 706 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 WISP3O95389 354 aaPredicted RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CHN1P15882 459 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 GP5P40197 560 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 GNGT1P63211 74 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 DCDP81605 110 aaKnown RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RALGDSQ12967 914 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 LRRC73Q5JTD7 316 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RWDD4Q6NW29 188 aaKnown RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 ADAMTSL4Q6UY14 1074 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TRIM42Q8IWZ5 723 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SHISA5Q8N114 240 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 MPP5Q8N3R9 675 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 OR6Y1Q8NGX8 325 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RDH11Q8TC12 318 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CALML6Q8TD86 181 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 NUS1Q96E22 293 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CHMP6Q96FZ7 201 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TUBGCP5Q96RT8 1024 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 LYSMD1Q96S90 227 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 RBBP8Q99708 897 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 FAM167BQ9BTA0 163 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SYBUQ9NX95 663 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 FCF1Q9Y324 198 aaKnown RBP6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SNX10Q9Y5X0 201 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 HS3ST3B1Q9Y662 390 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SYNJ2BP-COX16A0A087WUM0 186 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 TMEM120BA0PK00 339 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 HMX2A2RU54 273 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 E7EQ34 232 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SOCS5O75159 536 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 WFS1O76024 890 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ONECUT2O95948 504 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 INHBAP08476 426 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 PAMP19021 973 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 DRD4P21917 467 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 CA4P22748 312 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 NUMBP49757 651 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 HK2P52789 917 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ADARP55265 1226 aaKnown RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 AP1S1P61966 158 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ZKSCAN8Q15776 578 aaPredicted RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 RBBP7Q16576 425 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 TEDDM1Q5T9Z0 273 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 FAM91A1Q658Y4 838 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 KIRREL2Q6UWL6 708 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 C6orf89Q6UWU4 347 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 PACS1Q6VY07 963 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 LIPIQ6XZB0 460 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 PGBD5Q8N414 524 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 C2CD4AQ8NCU7 369 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms