RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 AIF1LQ9BQI0 150 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 ZNF717Q9BY31 904 aaPredicted RBP17.66■□□□□ 0.42
USP39-201ENST00000323701 REXO4Q9GZR2 422 aaKnown RBP17.66■□□□□ 0.42
USP39-201ENST00000323701 AICDAQ9GZX7 198 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 PAIP1Q9H074 479 aaKnown RBP17.66■□□□□ 0.42
USP39-201ENST00000323701 CHRDQ9H2X0 955 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 RHBGQ9H310 441 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 ALG2Q9H553 416 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 TSC22D4Q9Y3Q8 395 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 COLEC10Q9Y6Z7 277 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 CACNA1IQ9P0X4 2223 aa17.66■□□□□ 0.42
USP39-201ENST00000323701 TRBV5-3A0A0A0MS03 114 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 GNG14A0A1W2PPG7 69 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 C19orf67A6NJJ6 358 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 GABRR3A8MPY1 467 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 OR1F1O43749 312 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 KCNH1O95259 989 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 PIM1P11309 404 aaPredicted RBP17.65■□□□□ 0.42
USP39-201ENST00000323701 HOXB9P17482 250 aaPredicted RBP17.65■□□□□ 0.42
USP39-201ENST00000323701 PRPS1L1P21108 318 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 CLNS1AP54105 237 aaKnown RBP17.65■□□□□ 0.42
USP39-201ENST00000323701 MC1RQ01726 317 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 KIAA1614Q5VZ46 1190 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 SPATA24Q86W54 205 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 AMIGO1Q86WK6 493 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 ADGRF3Q8IZF5 1079 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 MMP21Q8N119 569 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 RAB42Q8N4Z0 105 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 OR2L3Q8NG85 312 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 CLDN23Q96B33 292 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 TAAR2Q9P1P5 351 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 PCDHB14Q9Y5E9 798 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 PCDHB11Q9Y5F2 797 aa17.65■□□□□ 0.42
USP39-201ENST00000323701 PPM1DO15297 605 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 NPPAP01160 153 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 TNFP01375 233 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 KLK1P06870 262 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 NCK1P16333 377 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 OR4D2P58180 307 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 DMWDQ09019 674 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 ILF3Q12906 894 aaKnown RBP eCLIP17.64■□□□□ 0.425e-9■■■■■ 33.1
USP39-201ENST00000323701 IYDQ6PHW0 289 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 LRRC74BQ6ZQY2 392 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 METTL4Q8N3J2 472 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 SPEM1Q8N4L4 309 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 CXorf40BQ96DE9 158 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 METTL2AQ96IZ6 378 aaKnown RBP17.64■□□□□ 0.42
USP39-201ENST00000323701 ANKRD27Q96NW4 1050 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 NELL2Q99435 816 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 CD320Q9NPF0 282 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 MUTYHQ9UIF7 546 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 HEBP2Q9Y5Z4 205 aa17.64■□□□□ 0.42
USP39-201ENST00000323701 METTL12A8MUP2 240 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 PLPP1O14494 284 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 CHRM5P08912 532 aaPredicted RBP17.64■□□□□ 0.41
USP39-201ENST00000323701 GPR18Q14330 331 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 PRSS53Q2L4Q9 553 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 MAFAQ8NHW3 353 aaPredicted RBP17.64■□□□□ 0.41
USP39-201ENST00000323701 UBE2E3Q969T4 207 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 SLCO4A1Q96BD0 722 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 KLHDC7BQ96G42 594 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 RSRC1Q96IZ7 334 aaKnown RBP17.64■□□□□ 0.41
USP39-201ENST00000323701 DPH7Q9BTV6 452 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 RAB11FIP5Q9BXF6 653 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 MS4A8Q9BY19 250 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 MRPS30Q9NP92 439 aaKnown RBP17.64■□□□□ 0.41
USP39-201ENST00000323701 LHX9Q9NQ69 397 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 STOML1Q9UBI4 398 aa17.64■□□□□ 0.41
USP39-201ENST00000323701 HAT1O14929 419 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 SCAMP2O15127 329 aaKnown RBP17.63■□□□□ 0.41
USP39-201ENST00000323701 COX7A2P14406 83 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 BCL6P41182 706 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 KIR3DL1P43629 444 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 TRAP1Q12931 704 aaKnown RBP17.63■□□□□ 0.41
USP39-201ENST00000323701 ZNF385BQ569K4 471 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 PRRT3Q5FWE3 981 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 C10orf62Q5T681 223 aaPredicted RBP17.63■□□□□ 0.41
USP39-201ENST00000323701 SLC9B2Q86UD5 537 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 GPR180Q86V85 440 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 KBTBD2Q8IY47 623 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 CLECL1Q8IZS7 167 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 LILRA2Q8N149 483 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 FLVCR1-AS1Q8TAF5 88 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 MAN2B2Q9Y2E5 1009 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 EML5Q05BV3 1969 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 ANKDD1BA6NHY2 528 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 TOR1BO14657 336 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 ARPC2O15144 300 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 MAP3K13O43283 966 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 NDUFS2O75306 463 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 MYO1DO94832 1006 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 BCKDHBP21953 392 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 PTX3P26022 381 aaPredicted RBP17.63■□□□□ 0.41
USP39-201ENST00000323701 TPP2P29144 1249 aaPredicted RBP17.63■□□□□ 0.41
USP39-201ENST00000323701 GCKP35557 465 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 SLC14A1Q13336 389 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 MUM1Q2TAK8 710 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 KHDRBS2Q5VWX1 349 aaKnown RBP17.63■□□□□ 0.41
USP39-201ENST00000323701 DHFR2Q86XF0 187 aa17.63■□□□□ 0.41
USP39-201ENST00000323701 SPPL2CQ8IUH8 684 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms