RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 NSL1Q96IY1 281 aa18.85■□□□□ 0.61
CCDC71-201ENST00000321895 PPM1MQ96MI6 270 aa18.85■□□□□ 0.61
CCDC71-201ENST00000321895 MRPL1Q9BYD6 325 aaKnown RBP18.85■□□□□ 0.61
CCDC71-201ENST00000321895 OR51B5Q9H339 312 aa18.85■□□□□ 0.61
CCDC71-201ENST00000321895 C1GALT1Q9NS00 363 aa18.85■□□□□ 0.61
CCDC71-201ENST00000321895 TMEM45AQ9NWC5 275 aa18.85■□□□□ 0.61
CCDC71-201ENST00000321895 TAGLN3Q9UI15 199 aa18.85■□□□□ 0.61
CCDC71-201ENST00000321895 RUVBL1Q9Y265 456 aaKnown RBP18.85■□□□□ 0.61
CCDC71-201ENST00000321895 U3KQA8 63 aa18.85■□□□□ 0.61
CCDC71-201ENST00000321895 DUX1O43812 170 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 ATP5HO75947 161 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 SEMA3DO95025 777 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 TBX6O95947 436 aaPredicted RBP18.84■□□□□ 0.61
CCDC71-201ENST00000321895 T-ENOLP0DO92 83 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 G6PDP11413 515 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 PRPS2P11908 318 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 HOXB3P14651 431 aaPredicted RBP18.84■□□□□ 0.61
CCDC71-201ENST00000321895 PVRP15151 417 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 CDH3P22223 829 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 CALB2P22676 271 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 PPM1FP49593 454 aaPredicted RBP18.84■□□□□ 0.61
CCDC71-201ENST00000321895 OR1D5P58170 312 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 HERC3Q15034 1050 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 DEPDC1Q5TB30 811 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 KHDRBS2Q5VWX1 349 aaKnown RBP18.84■□□□□ 0.61
CCDC71-201ENST00000321895 CYP20A1Q6UW02 462 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 FAM9CQ8IZT9 166 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 CCDC74AQ96AQ1 378 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 ZDHHC12Q96GR4 267 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 CD180Q99467 661 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 SIRT5Q9NXA8 310 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 ZIM2Q9NZV7 527 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 PILRAQ9UKJ1 303 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 PCDHGB2Q9Y5G2 931 aa18.84■□□□□ 0.61
CCDC71-201ENST00000321895 LNP1A1A4G5 178 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 CAPN5O15484 640 aaPredicted RBP18.83■□□□□ 0.61
CCDC71-201ENST00000321895 SH3BGRLO75368 114 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 MYO1DO94832 1006 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 UNC5CO95185 931 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 BCKDHAP12694 445 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 MYF5P13349 255 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 CYP4F3Q08477 520 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 ZIC1Q15915 447 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 SPRED3Q2MJR0 410 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 NOXRED1Q6NXP6 359 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 GALNT18Q6P9A2 607 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 C1orf52Q8N6N3 182 aaKnown RBP18.83■□□□□ 0.61
CCDC71-201ENST00000321895 SUMF1Q8NBK3 374 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 NCSTNQ92542 709 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 NAT6Q93015 286 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 CENPKQ9BS16 269 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 LRFN3Q9BTN0 628 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 DNAAF2Q9NVR5 837 aaKnown RBP18.83■□□□□ 0.61
CCDC71-201ENST00000321895 DLGAP4Q9Y2H0 992 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 RP1P56715 2156 aa18.83■□□□□ 0.61
CCDC71-201ENST00000321895 ASXL3Q9C0F0 2248 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 TLCD2A6NGC4 264 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 HNRNPCL1O60812 293 aaKnown RBP18.83■□□□□ 0.6
CCDC71-201ENST00000321895 CTSVO60911 334 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 THRAP10827 490 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 ESRRAP11474 423 aaPredicted RBP18.83■□□□□ 0.6
CCDC71-201ENST00000321895 COX4I1P13073 169 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 SUZ12Q15022 739 aaKnown RBP18.83■□□□□ 0.6
CCDC71-201ENST00000321895 MAPRE2Q15555 327 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 AGKQ53H12 422 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 FBXO42Q6P3S6 717 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 PAOXQ6QHF9 649 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 RNF44Q7L0R7 432 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 SPRED1Q7Z699 444 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 CARFQ8N187 725 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 METTL4Q8N3J2 472 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 LIX1Q8N485 282 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 RP9Q8TA86 221 aaKnown RBP18.83■□□□□ 0.6
CCDC71-201ENST00000321895 TRAPPC9Q96Q05 1148 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 ZFYVE21Q9BQ24 234 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 KLHL25Q9H0H3 589 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 AHSPQ9NZD4 102 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 CCDC167Q9P0B6 97 aa18.83■□□□□ 0.6
CCDC71-201ENST00000321895 EME2A4GXA9 379 aaPredicted RBP18.82■□□□□ 0.6
CCDC71-201ENST00000321895 B4GAT1O43505 415 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 ZNF806P0C7X5 589 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 ST6GAL1P15907 406 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 TCF15Q12870 199 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 INAVAQ3KP66 663 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 TMEM35AQ53FP2 167 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 NKAIN2Q5VXU1 208 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 GUSBP11Q6P575 273 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 COMMD6Q7Z4G1 85 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 PLXDC1Q8IUK5 500 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 C19orf47Q8N9M1 422 aaKnown RBP18.82■□□□□ 0.6
CCDC71-201ENST00000321895 OR9I1Q8NGQ6 314 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 TGM7Q96PF1 710 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 OR2A5Q96R48 311 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 MAP3K3Q99759 626 aa18.82■□□□□ 0.6
CCDC71-201ENST00000321895 ANKRD28O15084 1053 aa18.81■□□□□ 0.6
CCDC71-201ENST00000321895 NDUFS4O43181 175 aa18.81■□□□□ 0.6
CCDC71-201ENST00000321895 SLC22A3O75751 556 aa18.81■□□□□ 0.6
CCDC71-201ENST00000321895 SERPIND1P05546 499 aa18.81■□□□□ 0.6
CCDC71-201ENST00000321895 SDC1P18827 310 aa18.81■□□□□ 0.6
CCDC71-201ENST00000321895 TIA1P31483 386 aaKnown RBP eCLIP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms