RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SFMBT2Q5VUG0 894 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PRR27Q6MZM9 219 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 KLC3Q6P597 504 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SLC27A1Q6PCB7 646 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PLXDC2Q6UX71 529 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 LINC00696Q6ZRV3 163 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PTOV1Q86YD1 416 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 APOBEC3FQ8IUX4 373 aaKnown RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ADHFE1Q8IWW8 467 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 RNF113BQ8IZP6 322 aaKnown RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 CLIP4Q8N3C7 705 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SFRP1Q8N474 314 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SSMEM1Q8WWF3 244 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ERO1AQ96HE7 468 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF778Q96MU6 729 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 OR1F2PQ96R84 312 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 PARK7Q99497 189 aaKnown RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM79Q9BSE2 394 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 DEFB129Q9H1M3 183 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 FN3KQ9H479 309 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 THAP9Q9H5L6 903 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 MINDY3Q9H8M7 445 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 KCNMB3Q9NPA1 279 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ACKR4Q9NPB9 350 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM30AQ9NV96 361 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF224Q9NZL3 707 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TBC1D7Q9P0N9 293 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.8□□□□□ -1.8
SMCO3-201ENST00000316048 SNX7Q9UNH6 387 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 LIPT1Q9Y234 373 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 TMED3Q9Y3Q3 217 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 GRIP1Q9Y3R0 1128 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 COL4A5P29400 1685 aa3.8□□□□□ -1.8
SMCO3-201ENST00000316048 A0A0G2JPF8 293 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ZCWPW2A0A1B0GU75 182 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 NEMP2A6NFY4 417 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 C5orf52A6NGY3 159 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 HNRNPCL3B7ZW38 293 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 STX10O60499 249 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE7O76087 117 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PMS2P2O95744 297 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 WDPCPO95876 746 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GSRP00390 522 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 VIMP08670 466 aaKnown RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 HNRNPCL4P0DMR1 293 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 JAK1P23458 1154 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 RPA1P27694 616 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 INHBEP58166 350 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CCZ1BP86790 482 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CCZ1P86791 482 aaPredicted RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ACTN3Q08043 901 aaPredicted RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF415Q09FC8 603 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE1Q13065 139 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE4Q13068 117 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 UGP2Q16851 508 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 SLC39A12Q504Y0 691 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 SYT14P1Q58G82 188 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ARMCX5Q6P1M9 558 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF549Q6P9A3 640 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 NHLRC1Q6VVB1 395 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 MSANTD1Q6ZTZ1 278 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ASB18Q6ZVZ8 466 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 RAPH1Q70E73 1250 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CCDC65Q8IXS2 484 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 GPC2Q8N158 579 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CSGALNACT2Q8N6G5 542 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF441Q8N8Z8 693 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 OR13J1Q8NGT2 312 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 VANGL1Q8TAA9 524 aaPredicted RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CRYGNQ8WXF5 182 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 DNASE1L2Q92874 299 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 P2RX5Q93086 422 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CCDC51Q96ER9 411 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 BSCL2Q96G97 398 aaPredicted RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 RAD9AQ99638 391 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 TSG101Q99816 390 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 EGFL8Q99944 293 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ACAT2Q9BWD1 397 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 MRPL44Q9H9J2 332 aaKnown RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PELI2Q9HAT8 420 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 B3GAT1Q9P2W7 334 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ITGA11Q9UKX5 1188 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CCPG1Q9ULG6 757 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 FER1L6Q2WGJ9 1857 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 EP400Q96L91 3159 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ELOVL7A1L3X0 281 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 MYMKA6NI61 221 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 LILRA5A6NI73 299 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 C19orf81C9J6K1 198 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ZNHIT1O43257 154 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CRYABP02511 175 aaKnown RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 MT-ND3P03897 115 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PLA2G4BP0C869 781 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 FAM106CPP0CH98 169 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 HAPLN1P10915 354 aaPredicted RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 EEF1B2P24534 225 aaKnown RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 NR4A2P43354 598 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms