RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 RASSF1Q9NS23 344 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 RBFOX1Q9NWB1 397 aaKnown RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 TTC24A2A3L6 582 aaPredicted RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 K7ERQ8 282 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 CASC3O15234 703 aaKnown RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 CHP2O43745 196 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 DDAH1O94760 285 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 CXCL14O95715 111 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 CRYBA1P05813 215 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 RD3LP0DJH9 198 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 CYP19A1P11511 503 aaPredicted RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 JUNDP17535 347 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 C5AR1P21730 350 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 CD96P40200 585 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 CACNB2Q08289 660 aaPredicted RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 TRIP4Q15650 581 aaPredicted RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 TIMM50Q3ZCQ8 353 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 AFMIDQ63HM1 303 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 ESRP1Q6NXG1 681 aaKnown RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 GJB7Q6PEY0 223 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 PAPD5Q8NDF8 572 aaKnown RBP9.04□□□□□ -0.96
BDNF-201ENST00000314915 OR9A2Q8NGT5 310 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 WDR20Q8TBZ3 569 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 HGDQ93099 445 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 MS4A3Q96HJ5 214 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 APOL2Q9BQE5 337 aa9.04□□□□□ -0.96
BDNF-201ENST00000314915 SLIT1O75093 1534 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 PRKYO43930 277 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 FADS1O60427 444 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 MAP2K4P45985 399 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 CD81P60033 236 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZNF284Q2VY69 593 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 FAM98BQ52LJ0 330 aaKnown RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 N4BP2L1Q5TBK1 243 aaPredicted RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 PLEKHH3Q7Z736 793 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 KLBQ86Z14 1044 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SVBPQ8N300 66 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 C19orf18Q8NEA5 215 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 COQ8BQ96D53 544 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZNF845Q96IR2 970 aaPredicted RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 FAM84BQ96KN1 310 aaPredicted RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 ACOX2Q99424 681 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SLC29A3Q9BZD2 475 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 MKNK2Q9HBH9 465 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZFP64Q9NPA5 681 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 MUTYHQ9UIF7 546 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 MMACHCQ9Y4U1 282 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 LRIG2O94898 1065 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ITGAVP06756 1048 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 CNPP09543 421 aaKnown RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZSCAN5DPP0CG00 497 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZNF888P0CJ79 500 aaPredicted RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 LHCGRP22888 699 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ITGA3P26006 1051 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 MPIP34949 423 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 NRIP1P48552 1158 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SEC13P55735 322 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZNF280AP59817 542 aaPredicted RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 BTG1P62324 171 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 TNFRSF17Q02223 184 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 NR6A1Q15406 480 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 GUCA2BQ16661 112 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 CYP51A1Q16850 503 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 DARS2Q6PI48 645 aaKnown RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 RHOT1Q8IXI2 618 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SLC39A7Q92504 469 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 WDFY2Q96P53 400 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 KCNJ15Q99712 375 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 KATNB1Q9BVA0 655 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 FTHL17Q9BXU8 183 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SMURF1Q9HCE7 757 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 PPIL1Q9Y3C6 166 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 PIK3C2BO00750 1634 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 OR2A25A4D2G3 310 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 GATBO75879 557 aaKnown RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 IFNB1P01574 187 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 CRHP06850 196 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 USP17L7P0C7H9 530 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SERTAD2Q14140 314 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 PCLAFQ15004 111 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 LGALSLQ3ZCW2 172 aaPredicted RBP9.03□□□□□ -0.96
BDNF-201ENST00000314915 GLRA4Q5JXX5 417 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 FRMPD2BQ6IN97 320 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 TMPRSS11FQ6ZWK6 438 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 IFNEQ86WN2 208 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SPPL2CQ8IUH8 684 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 PDZD9Q8IXQ8 264 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZNF454Q8N9F8 522 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ROPN1LQ96C74 230 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ASB16Q96NS5 453 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 B3GNT5Q9BYG0 378 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 ZFP57Q9NU63 452 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 C3orf18Q9UK00 162 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 DNPEPQ9ULA0 475 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 PCDHA10Q9Y5I2 948 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 LAMB1P07942 1786 aa9.03□□□□□ -0.96
BDNF-201ENST00000314915 SLC35F4A4IF30 521 aa9.02□□□□□ -0.96
BDNF-201ENST00000314915 GSG1L2A8MUP6 293 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms