RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 C8orf74Q6P047 294 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 ADAMTSL2Q86TH1 951 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 RELL1Q8IUW5 271 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 CLEC1AQ8NC01 280 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 ATL1Q8WXF7 558 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 PSMF1Q92530 271 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 TSNARE1Q96NA8 513 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 CLMPQ9H6B4 373 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 MKKSQ9NPJ1 570 aaPredicted RBP13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 ATP13A2Q9NQ11 1180 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 C14orf105Q9NVL8 296 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 COPG2Q9UBF2 871 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 ASB1Q9Y576 335 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 CSAG2Q9Y5P2 127 aa13.83□□□□□ -0.2
PPP1CA-201ENST00000312989 HPP00738 406 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 SMIM10L1P0DMW3 83 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 GGT5P36269 586 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 KCNC4Q03721 635 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 OCA2Q04671 838 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 ILF2Q12905 390 aaKnown RBP13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 USP10Q14694 798 aaKnown RBP13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 PCOLCEQ15113 449 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 RBBP7Q16576 425 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 TUBB8Q3ZCM7 444 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 CMC1Q7Z7K0 106 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 CCDC25Q86WR0 208 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 PPM1NQ8N819 430 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 CAMKVQ8NCB2 501 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 NT5CQ8TCD5 201 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 CREB3L4Q8TEY5 395 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 SLC13A3Q8WWT9 602 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 CDKL2Q92772 493 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 SMIM10Q96HG1 83 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 FUT8Q9BYC5 575 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 TRIM54Q9BYV2 358 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 VN1R1Q9GZP7 353 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 PELI2Q9HAT8 420 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 NINJ2Q9NZG7 142 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 LUZP4Q9P127 313 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 CTNNAL1Q9UBT7 734 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 SLC22A7Q9Y694 548 aa13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 SETXQ7Z333 2677 aaKnown RBP13.82□□□□□ -0.2
PPP1CA-201ENST00000312989 IGHV1-45A0A0A0MS14 117 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 OR2W5A6NFC9 320 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 SGK494L7N484 410 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 PRPF4O43172 522 aaKnown RBP eCLIP13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 DPM1O60762 260 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 B3GALT4O96024 378 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 CELA2AP08217 269 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 ANXA5P08758 320 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 CCDC166P0CW27 439 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 ACPPP15309 386 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 STMN1P16949 149 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 VARSP26640 1264 aaKnown RBP13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 RAB10P61026 200 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 PWP1Q13610 501 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 FBXO48Q5FWF7 155 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 GRTP1Q5TC63 336 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 NXPE4Q6UWF7 544 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 SLCO4C1Q6ZQN7 724 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 Q6ZS92 163 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 HPS6Q86YV9 775 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 PDPRQ8NCN5 879 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 OR5T3Q8NGG3 340 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 ZCCHC10Q8TBK6 192 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 PNPLA2Q96AD5 504 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 WDR77Q9BQA1 342 aaPredicted RBP13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 MFRPQ9BY79 579 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 FAM129AQ9BZQ8 928 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 SLC6A16Q9GZN6 736 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 LANCL2Q9NS86 450 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 IGSF5Q9NSI5 407 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 ZFP69BQ9UJL9 534 aa13.81□□□□□ -0.2
PPP1CA-201ENST00000312989 FLNBO75369 2602 aaKnown RBP13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 NUP210LQ5VU65 1888 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 NDUFS4O43181 175 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 OR1F1O43749 312 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 GALR3O60755 368 aaPredicted RBP13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 RDH16O75452 317 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 KLHL18O94889 574 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 CD22P20273 847 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 STX2P32856 288 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 SOX11P35716 441 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 AHRP35869 848 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 HNMTP50135 292 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 EMP2P54851 167 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 ATP6V0D1P61421 351 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 NAB1Q13506 487 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 E2F2Q14209 437 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 NDUFA9Q16795 377 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 PLEKHN1Q494U1 663 aaPredicted RBP13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 VN1R5Q7Z5H4 357 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 TMPRSS11BQ86T26 416 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 ISCA2Q86U28 154 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 CTAGE3PQ8IX95 158 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 PARP9Q8IXQ6 854 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 CENPLQ8N0S6 344 aaPredicted RBP13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 KIAA1191Q96A73 305 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 ESAMQ96AP7 390 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms