RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MT-ND3P03897 115 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 SNRPAP09012 282 aaKnown RBP11.44□□□□□ -0.58
SCFD1-201ENST00000311943 CREB1P16220 341 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 TNFRSF8P28908 595 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 UCNP55089 124 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 RPS15P62841 145 aaKnown RBP11.44□□□□□ -0.58
SCFD1-201ENST00000311943 ATP1A4Q13733 1029 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 TAF1BQ53T94 588 aaPredicted RBP11.44□□□□□ -0.58
SCFD1-201ENST00000311943 TEX9Q8N6V9 391 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 RERGQ96A58 199 aaPredicted RBP11.44□□□□□ -0.58
SCFD1-201ENST00000311943 ZBTB26Q9HCK0 441 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 PCDHGA6Q9Y5G7 932 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 KCNMB2Q9Y691 235 aa11.44□□□□□ -0.58
SCFD1-201ENST00000311943 A6NL46 340 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 SAP18O00422 153 aaKnown RBP11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CLGNO14967 610 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 RDH16O75452 317 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CCNDBP1O95273 360 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF888P0CJ79 500 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-201ENST00000311943 C1GALT1C1LP0DN25 315 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
SCFD1-201ENST00000311943 GGT5P36269 586 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 SCTRP47872 440 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CDH13P55290 713 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 REEP5Q00765 189 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 KLC1Q07866 573 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CDC16Q13042 620 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 DEFB134Q4QY38 66 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 TCTE1Q5JU00 501 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 SULT1C3Q6IMI6 304 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 TMEM214Q6NUQ4 689 aaKnown RBP11.43□□□□□ -0.58
SCFD1-201ENST00000311943 SH2D5Q6ZV89 423 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 ASPGQ86U10 573 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 PTGR2Q8N8N7 351 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-201ENST00000311943 MFSD9Q8NBP5 474 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 OR52B6Q8NGF0 335 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CREB3L4Q8TEY5 395 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 ATL1Q8WXF7 558 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 HAUS8Q9BT25 410 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 SORBS1Q9BX66 1292 aaKnown RBP11.43□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF304Q9HCX3 659 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 DNAJC11Q9NVH1 559 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 TRPC4Q9UBN4 977 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 EMCNQ9ULC0 261 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 DYRK1BQ9Y463 629 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 KCNE2Q9Y6J6 123 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 IGHV3-20A0A0C4DH32 117 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 C21orf140B9A014 251 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 KRT38O76015 456 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 GFAPP14136 432 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 AGXTP21549 392 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CCR10P46092 362 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 HNMTP50135 292 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CHIT1Q13231 466 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 ACAP2Q15057 778 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 FAM83EQ2M2I3 478 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 XKR6Q5GH73 641 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 CYB5D1Q6P9G0 228 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 OVCH1Q7RTY7 1134 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 PPP1R32Q7Z5V6 425 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 C4orf33Q8N1A6 199 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 TTC29Q8NA56 475 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-201ENST00000311943 STT3BQ8TCJ2 826 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 KCND3Q9UK17 655 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 SRPK3Q9UPE1 567 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 NAALAD2Q9Y3Q0 740 aa11.43□□□□□ -0.58
SCFD1-201ENST00000311943 KCNE1BA0A087WTH5 132 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 MYOCOSA0A1B0GUC4 107 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 TRBC2A0A5B9 178 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 FAM227AF5H4B4 570 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 RTCAO00442 366 aaKnown RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 FKBP9O95302 570 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 CELA2AP08217 269 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 CCND1P24385 295 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 EEF1DP29692 281 aaKnown RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 NEK2P51955 445 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 POLE2P56282 527 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 RPS15AP62244 130 aaKnown RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 SETDB1Q15047 1291 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 PDK4Q16654 411 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 MUM1Q2TAK8 710 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 FAM214AQ32MH5 1076 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 CEP128Q6ZU80 1094 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 PTRH1Q86Y79 214 aaKnown RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 MYLK4Q86YV6 388 aaPredicted RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 ZSCAN1Q8NBB4 408 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 CCT6BQ92526 530 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 DRC3Q9H069 523 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 PCBD2Q9H0N5 130 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 NUDT4Q9NZJ9 180 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 ANKMY1Q9P2S6 941 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 E2F3O00716 465 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 OR7A17O14581 309 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 KLK8O60259 260 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 WFS1O76024 890 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 ZGLP1P0C6A0 271 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 GNAZP19086 355 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 SERPINB9P50453 376 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 CCL11P51671 97 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms