RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 FAM120CQ9NX05 1096 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 KLHL28Q9NXS3 571 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 PCDHGA3Q9Y5H0 932 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 C8GP07360 202 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 ANXA11P50995 505 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 XKP51811 444 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 EPHB3P54753 998 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 XAF1Q6GPH4 301 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 OR8H3Q8N146 312 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 PGBD5Q8N414 524 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 TTC9BQ8N6N2 239 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 ZNF614Q8N883 585 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 C11orf24Q96F05 449 aaPredicted RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 VMP1Q96GC9 406 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 MBOAT4Q96T53 435 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 ZNF224Q9NZL3 707 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 DNMT3AQ9Y6K1 912 aaPredicted RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 TRIP11Q15643 1979 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 SLX4Q8IY92 1834 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 A0A0U1RQF3 1178 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 KDELR3O43731 214 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 TLX2O43763 284 aaPredicted RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 ERAL1O75616 437 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 RPL3P39023 403 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 RGRP47804 291 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 CLCN4P51793 760 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 CXCR4P61073 352 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 BICRALQ6AI39 1079 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 RNF180Q86T96 592 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 APIPQ96GX9 242 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 ZNF607Q96SK3 696 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 RHNO1Q9BSD3 238 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 DOHHQ9BU89 302 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 PRAMEF33A0A0G2JMD5 474 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 PRAMEF10O60809 474 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 TGFB1P01137 390 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 ITGAMP11215 1152 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 ACLYP53396 1101 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 CBLBQ13191 982 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 SOWAHCQ53LP3 525 aaPredicted RBP13.02□□□□□ -0.32
SEC23A-201ENST00000307712 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.32
SEC23A-201ENST00000307712 NRARPQ7Z6K4 114 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 ZNF671Q8TAW3 534 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 CCM2Q9BSQ5 444 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 RIMKLBQ9ULI2 386 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 UGT2A1Q9Y4X1 527 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 OARD1Q9Y530 152 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 ASB1Q9Y576 335 aa13.02□□□□□ -0.32
SEC23A-201ENST00000307712 SHROOM3Q8TF72 1996 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 KPNA3O00505 521 aaPredicted RBP13.02□□□□□ -0.33
SEC23A-201ENST00000307712 IFNGR2P38484 337 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 LIPAP38571 399 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 RPL34P49207 117 aaKnown RBP13.02□□□□□ -0.33
SEC23A-201ENST00000307712 CLK3P49761 638 aaKnown RBP13.02□□□□□ -0.33
SEC23A-201ENST00000307712 VLDLRP98155 873 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 BTBD16Q32M84 506 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 FAM214AQ32MH5 1076 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.02□□□□□ -0.33
SEC23A-201ENST00000307712 CATSPEREQ5SY80 951 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 ZNF280BQ86YH2 543 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 GEMIN6Q8WXD5 167 aaKnown RBP13.02□□□□□ -0.33
SEC23A-201ENST00000307712 DOK1Q99704 481 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 CMAHPQ9Y471 501 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 SESN1Q9Y6P5 492 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 SLC38A8A6NNN8 435 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 GUCY1B2O75343 617 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 LAMP1P11279 417 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 HTR2BP41595 481 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 ABATP80404 500 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 NFATC2Q13469 925 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 GDF6Q6KF10 455 aaPredicted RBP13.02□□□□□ -0.33
SEC23A-201ENST00000307712 MED27Q6P2C8 311 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 USP51Q70EK9 711 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 ZNF367Q7RTV3 350 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 GALNT7Q86SF2 657 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 MAPKAP1Q9BPZ7 522 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 CSNK1G1Q9HCP0 422 aa13.02□□□□□ -0.33
SEC23A-201ENST00000307712 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.33
SEC23A-201ENST00000307712 STRCQ7RTU9 1775 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 CENPBD1B2RD01 187 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 WBP4O75554 376 aaKnown RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 TACR1P25103 407 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 EIF2DP41214 584 aaKnown RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 CSKP41240 450 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SELENBP1Q13228 472 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 NFE2L1Q14494 772 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 GPR33Q49SQ1 333 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 GPAT3Q53EU6 434 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 ADGRF1Q5T601 910 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 LRRC70Q7Z2Q7 622 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 OR9Q2Q8NGE9 314 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 DNASE1L2Q92874 299 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms