RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SOX11P35716 441 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 GSTM5P46439 218 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 CCR8P51685 355 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 FAM71E1Q6IPT2 247 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 VN1R5Q7Z5H4 357 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 GPR156Q8NFN8 814 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 AURKBQ96GD4 344 aaPredicted RBP18.65■□□□□ 0.58
HOXC4-201ENST00000303406 INSM2Q96T92 566 aaPredicted RBP18.65■□□□□ 0.58
HOXC4-201ENST00000303406 MVB12BQ9H7P6 319 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 DNAJB9Q9UBS3 223 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 TAC3Q9UHF0 121 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 BTBD3Q9Y2F9 522 aa18.65■□□□□ 0.58
HOXC4-201ENST00000303406 A0A1W2PPV9 198 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 C1orf226A1L170 272 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 HPRP00739 348 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 TGFB1P01137 390 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 ACP5P13686 325 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 MYBPC1Q00872 1141 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 GRSF1Q12849 480 aaKnown RBP eCLIP18.64■□□□□ 0.58
HOXC4-201ENST00000303406 VEZF1Q14119 521 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 VMACQ2NL98 169 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 ZNF621Q6ZSS3 439 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 CHST15Q7LFX5 561 aaPredicted RBP18.64■□□□□ 0.58
HOXC4-201ENST00000303406 TDHQ8IZJ6 230 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 NATD1Q8N6N6 113 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 CDC26Q8NHZ8 85 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 C16orf78Q8WTQ4 265 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 SNX19Q92543 992 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 NCLNQ969V3 563 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 SH3KBP1Q96B97 665 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 SIPA1Q96FS4 1042 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 MRPS26Q9BYN8 205 aaKnown RBP18.64■□□□□ 0.58
HOXC4-201ENST00000303406 NTN4Q9HB63 628 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 PNPLA3Q9NST1 481 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 VPS4AQ9UN37 437 aa18.64■□□□□ 0.58
HOXC4-201ENST00000303406 SAMD4AQ9UPU9 718 aaKnown RBP18.64■□□□□ 0.58
HOXC4-201ENST00000303406 EXO1Q9UQ84 846 aaKnown RBP18.64■□□□□ 0.58
HOXC4-201ENST00000303406 UPK1AO00322 258 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 TBX19O60806 448 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 B3GALT4O96024 378 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 FUCA1P04066 466 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 FURINP09958 794 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 SMIM18P0DKX4 95 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 PKLRP30613 574 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 RAB28P51157 221 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 MERTKQ12866 999 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 MYBPC3Q14896 1274 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 SF1Q15637 639 aaKnown RBP18.64■□□□□ 0.57
HOXC4-201ENST00000303406 ZNF551Q7Z340 670 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-201ENST00000303406 SLC9B2Q86UD5 537 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 ZZZ3Q8IYH5 903 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 C10orf111Q8N326 155 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 LMNTD1Q8N9Z9 388 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 OR2L8Q8NGY9 312 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 FBXO30Q8TB52 745 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 KLK6Q92876 244 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D20Q96BZ9 403 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 C12orf66Q96MD2 445 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 RDH12Q96NR8 316 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 CAMK1GQ96NX5 476 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 FERD3LQ96RJ6 166 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 ADI1Q9BV57 179 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 MS4A8Q9BY19 250 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 OR51B5Q9H339 312 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 CARS2Q9HA77 564 aaKnown RBP18.64■□□□□ 0.57
HOXC4-201ENST00000303406 TPT1P8Q9HAU6 139 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 PRM3Q9NNZ6 103 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 AASDHPPTQ9NRN7 309 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 SMPD3Q9NY59 655 aaPredicted RBP18.64■□□□□ 0.57
HOXC4-201ENST00000303406 NDUFA13Q9P0J0 144 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 AK5Q9Y6K8 562 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 PIAS3Q9Y6X2 628 aa18.64■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3DA0A087WVF3 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3IA0A087WXS9 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3EA0A087X179 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3KA0A087X1G2 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3FA6NER0 549 aaPredicted RBP18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3LB9A6J9 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 PDLIM1O00151 329 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 EI24O14681 340 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 YY2O15391 372 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 KDM1AO60341 852 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 PRKD3O94806 890 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 KCNK5O95279 499 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 CPSF4O95639 269 aaKnown RBP18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3HP0C7X1 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 DDX5P17844 614 aaKnown RBP18.63■□□□□ 0.57
HOXC4-201ENST00000303406 MYF6P23409 242 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 RPS9P46781 194 aaKnown RBP18.63■□□□□ 0.57
HOXC4-201ENST00000303406 MEF2AQ02078 507 aaPredicted RBP18.63■□□□□ 0.57
HOXC4-201ENST00000303406 MLF2Q15773 248 aaPredicted RBP18.63■□□□□ 0.57
HOXC4-201ENST00000303406 ADRM1Q16186 407 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 SLC36A3Q495N2 470 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 DEPDC1Q5TB30 811 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3GQ6DHY5 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3CQ6IPX1 549 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 ENPP6Q6UWR7 440 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TRIM69Q86WT6 500 aa18.63■□□□□ 0.57
HOXC4-201ENST00000303406 TBC1D3Q8IZP1 549 aaPredicted RBP18.63■□□□□ 0.57
HOXC4-201ENST00000303406 CLECL1Q8IZS7 167 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms