RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 FNBP1LQ5T0N5 605 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CAPN13Q6MZZ7 669 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TAPT1Q6NXT6 567 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 REPS2Q8NFH8 660 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 OR2T11Q8NH01 316 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SELENOMQ8WWX9 145 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 C22orf15Q8WYQ4 148 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 BORCS6Q96GS4 357 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 HS6ST2Q96MM7 605 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CRTAC1Q9NQ79 661 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 DTLQ9NZJ0 730 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 OR12D3Q9UGF7 316 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SLC27A6Q9Y2P4 619 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SOX15O60248 233 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SLC43A1O75387 559 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CETPP11597 493 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CDK4P11802 303 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF30P17039 623 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 KELP23276 732 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 WEE1P30291 646 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 PRKAR1BP31321 381 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 MAP2K3P46734 347 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TBX4P57082 545 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TAS2R41P59536 307 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 FLI1Q01543 452 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CRYZQ08257 329 aaKnown RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 MPPED2Q15777 294 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 DOK7Q18PE1 504 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 EXOC3L2Q2M3D2 409 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 DNM1P34Q6PK57 102 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 BLOC1S3Q6QNY0 202 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 UQCC3Q6UW78 93 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 PTCHD4Q6ZW05 846 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SPRED1Q7Z699 444 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 FUNDC1Q8IVP5 155 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 DCUN1D3Q8IWE4 304 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 PDZD9Q8IXQ8 264 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 GPR135Q8IZ08 494 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 FIBCD1Q8N539 461 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SYT11Q9BT88 431 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF717Q9BY31 904 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 DNTTIP1Q9H147 329 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ADAM18Q9Y3Q7 739 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 BRWD1Q9NSI6 2320 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SMIM35A0A1B0GVV1 85 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TNFRSF11BO00300 401 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 IMPA2O14732 288 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SULT1C4O75897 302 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 PRAMEF12O95522 483 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CCNYL3P0C7X3 344 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CD36P16671 472 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 IRF8Q02556 426 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 RAPSNQ13702 412 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TGFBIQ15582 683 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 OTUD3Q5T2D3 398 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SYT6Q5T7P8 510 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CHSY3Q70JA7 882 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 POU5F2Q8N7G0 328 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 C17orf62Q9BQA9 187 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ARNT2Q9HBZ2 717 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ALG13Q9NP73 1137 aaKnown RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TOR4AQ9NXH8 423 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 RGS17Q9UGC6 210 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 NCF1BA6NI72 391 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 NCF1CA8MVU1 366 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 H3BRB1 525 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 DGKIO75912 1065 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 THP07101 528 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 IL7RP16871 459 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 HOXB9P17482 250 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ARL2P36404 184 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 LIMK1P53667 647 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CRISP3P54108 245 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SNRPD1P62314 119 aaKnown RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 CLCQ05315 142 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 MSS51Q4VC12 460 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 FNDC3BQ53EP0 1204 aaKnown RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 DNAJC22Q8N4W6 341 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SLC39A7Q92504 469 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 EEF2KMTQ96G04 330 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 P2RY11Q96G91 374 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 PANX1Q96RD7 426 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ACO2Q99798 780 aaKnown RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 RBCK1Q9BYM8 510 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF436Q9C0F3 470 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SRRDQ9UH36 339 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 NRXN3Q9Y4C0 1643 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 OR6C6A6NF89 314 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 AGAP5A6NIR3 686 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 OR2AG2A6NM03 316 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 YKT6O15498 198 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SOCS5O75159 536 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 JUPP14923 745 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TSPAN5P62079 268 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 RAB40BQ12829 278 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 TIGD2Q4W5G0 525 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 UNQ6126/PRO20091Q6UXV3 157 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 XYLT1Q86Y38 959 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SKA3Q8IX90 412 aa5.1□□□□□ -1.59
SCN1A-201ENST00000303395 SLC15A3Q8IY34 581 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms