RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 IGLV3-22A0A075B6J6 115 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 FBP2O00757 339 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SCDO00767 359 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MT-ND2P03891 347 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SLC6A6P31641 620 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 OGFRL1Q5TC84 451 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 BORAQ6PGQ7 559 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 RAB11FIP2Q7L804 512 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 REM2Q8IYK8 340 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 UBQLNLQ8IYU4 475 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GNPDA2Q8TDQ7 276 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SLA2Q9H6Q3 261 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ENAMQ9NRM1 1142 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NOP16Q9Y3C1 178 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 AP1M2Q9Y6Q5 423 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 KLHL33A6NCF5 533 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 EIF1AYO14602 144 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 OR7A10O76100 309 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SELPP16109 830 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 UQCRC2P22695 453 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 EIF1AXP47813 144 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MPP2Q14168 576 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TPGS2Q68CL5 300 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NPAS4Q8IUM7 802 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 EGFL6Q8IUX8 553 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PYROXD2Q8N2H3 581 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ELP5Q8TE02 316 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NKD1Q969G9 470 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MAELQ96JY0 434 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CCDC106Q9BWC9 280 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SLC2A11Q9BYW1 496 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SERINC1Q9NRX5 453 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PAK1IP1Q9NWT1 392 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 HSPB11Q9Y547 144 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ASB3Q9Y575 518 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CAPN5O15484 640 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PPP1R11O60927 126 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CDRT1O95170 752 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CLCNKBP51801 687 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 STC1P52823 247 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TRAM2Q15035 370 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PITRM1Q5JRX3 1037 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 UBXN11Q5T124 520 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GARNL3Q5VVW2 1013 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 KANK2Q63ZY3 851 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 HS3ST5Q8IZT8 346 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 RHEBL1Q8TAI7 183 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PSMG2Q969U7 264 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CCM2Q9BSQ5 444 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ATG10Q9H0Y0 220 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 H0YGN5 161 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 WNT7AO00755 349 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 DLX3O60479 287 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 OXSR1O95747 527 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MAGEA8P43361 318 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CLCA4Q14CN2 919 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TBRG1Q3YBR2 411 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 SIRPB2Q5JXA9 342 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PLEKHG7Q6ZR37 379 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 IQCHQ86VS3 1027 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF675Q8TD23 568 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PREBQ9HCU5 417 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GNG8Q9UK08 70 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 IFT52Q9Y366 437 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NFS1Q9Y697 457 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CHRM1P11229 460 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CDK6Q00534 326 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MOGSQ13724 837 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GRK1Q15835 563 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PUS10Q3MIT2 529 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ALG10Q5BKT4 473 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 C6orf183Q5T699 404 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PHC2Q8IXK0 858 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 HCAR2Q8TDS4 363 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ALPK1Q96QP1 1244 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ACTL8Q9H568 366 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NMUR1Q9HB89 426 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CPNE5Q9HCH3 593 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CCM2LQ9NUG4 571 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 ZDHHC2Q9UIJ5 367 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 NINQ8N4C6 2090 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 FOXO6A8MYZ6 492 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM150CB9EJG8 249 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 WNT9AO14904 365 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 PLD2O14939 933 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GNAO1P09471 354 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 CXCR1P25024 350 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 MECP2P51608 486 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GRIK2Q13002 908 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 GAS6Q14393 721 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 C12orf65Q9H3J6 166 aaKnown RBP7.42□□□□□ -1.22
SF3B3-201ENST00000302516 UCKL1Q9NWZ5 548 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 TAS2R9Q9NYW1 312 aa7.42□□□□□ -1.22
SF3B3-201ENST00000302516 BHMG1C9JSJ3 638 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SLC16A5O15375 505 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 MSL3P1P0C860 447 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF763Q0D2J5 394 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SLBPQ14493 270 aaKnown RBP eCLIP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF783Q6ZMS7 281 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms