RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CHD6Q8TD26 2715 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 HYKKA2RU49 373 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 CDC14CA4D256 554 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 DPPA5A6NC42 116 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 TCP11X1B4DZS4 312 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 HAT1O14929 419 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 PEX11AO75192 247 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 RAB40ALP0C0E4 278 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 CDH1P12830 882 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 TYK2P29597 1187 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 ALDH3A1P30838 453 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 GRK3P35626 688 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 GMPRP36959 345 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 HNMTP50135 292 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 CDKL1Q00532 357 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 SLC9A5Q14940 896 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 TGFBIQ15582 683 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 YOD1Q5VVQ6 348 aaPredicted RBP11.54□□□□□ -0.56
HMGB2-201ENST00000296503 SLC44A1Q8WWI5 657 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 ZNF285Q96NJ3 590 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 CATSPER2Q96P56 530 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 GBP5Q96PP8 586 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 C17orf62Q9BQA9 187 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 TUBB6Q9BUF5 446 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 DCLRE1BQ9H816 532 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 NMRAL1Q9HBL8 299 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 FGFR1OP2Q9NVK5 253 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 CD274Q9NZQ7 290 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 RNF112Q9ULX5 631 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 SLC22A14Q9Y267 594 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 DYRK1BQ9Y463 629 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
HMGB2-201ENST00000296503 A0A1B0GX78 115 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 TLDC2A0PJX2 215 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 ERVH48-1M5A8F1 160 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 DSCR3O14972 297 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 C2P06681 752 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 SLC35E2BP0CK96 405 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 PIM1P11309 404 aaPredicted RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 SERPINB9P50453 376 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 CSNK1G2P78368 415 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 OCRLQ01968 901 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 RELAQ04206 551 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 CDC20Q12834 499 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 SETDB1Q15047 1291 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 TBR1Q16650 682 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 DEFB109BQ30KR1 87 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 NKAIN1Q4KMZ8 207 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 ZNF385CQ66K41 422 aaPredicted RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 THOC6Q86W42 341 aaKnown RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 CSNK1A1LQ8N752 337 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 STAG3L4Q8TBR4 150 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 DYDC1Q8WWB3 177 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 KIAA1191Q96A73 305 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 OR2A5Q96R48 311 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 PAFAH2Q99487 392 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 SH2B3Q9UQQ2 575 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 USH1CQ9Y6N9 552 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 CFAP47Q6ZTR5 3102 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 NBEAQ8NFP9 2946 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 FAM208BQ5VWN6 2430 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 A0A087X1B8 175 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 EXOC1LA0A1B0GW35 172 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 FEZF1A0PJY2 475 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 TMEM120BA0PK00 339 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 HMX2A2RU54 273 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 FITM1A5D6W6 292 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 EIF4E1BA6NMX2 242 aaKnown RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 ENO4A6NNW6 628 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 TXNDC9O14530 226 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 DCTN3O75935 186 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 KRT38O76015 456 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 S100BP04271 92 aaPredicted RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 ITGB2P05107 769 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 CAPN1P07384 714 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 LTA4HP09960 611 aaKnown RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 TFEBP19484 476 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 GDF5P43026 501 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 CCR8P51685 355 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 RPS15AP62244 130 aaKnown RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 OR4D1Q15615 310 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 FAM83EQ2M2I3 478 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 MUM1Q2TAK8 710 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 C18orf21Q32NC0 220 aaPredicted RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 SYVN1Q86TM6 617 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 METTL27Q8N6F8 245 aaPredicted RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 TTC9Q92623 222 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 EXT2Q93063 718 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 UTP4Q969X6 686 aaKnown RBP11.53□□□□□ -0.56
HMGB2-201ENST00000296503 PTERQ96BW5 349 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 RHBDF1Q96CC6 855 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 NXNL1Q96CM4 212 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 OR4K3Q96R72 315 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 FAM117AQ9C073 453 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 VPS11Q9H270 941 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 ALG9Q9H6U8 611 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 SAR1AQ9NR31 198 aa11.53□□□□□ -0.56
HMGB2-201ENST00000296503 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms