RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SNIP1Q8TAD8 396 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 NRG4Q8WWG1 115 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 AIFM2Q9BRQ8 373 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 TSSK6Q9BXA6 273 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 CYTH4Q9UIA0 394 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 BTBD19C9JJ37 291 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 J3KR12 359 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 CAPN5O15484 640 aaPredicted RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 MATN4O95460 622 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SLC35E2BP0CK96 405 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 RPL19P84098 196 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SLC3A1Q07837 685 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SEC23BQ15437 767 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 HFE2Q6ZVN8 426 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF627Q7L945 461 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 GALNT13Q8IUC8 556 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 RGMAQ96B86 450 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 S100A16Q96FQ6 103 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 MSANTD3Q96H12 275 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 RBM18Q96H35 190 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 TSGA13Q96PP4 275 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 MGLLQ99685 303 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 EXTL2Q9UBQ6 330 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SRRDQ9UH36 339 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 RNF11Q9Y3C5 154 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 HS3ST4Q9Y661 456 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SLC38A8A6NNN8 435 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SAP18O00422 153 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 TGFB1P01137 390 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 MT-ND5P03915 603 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 CCR8P51685 355 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SERINC3Q13530 473 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 TIGD5Q53EQ6 642 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 FAM182AQ5T1J6 154 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 UGT2A3Q6UWM9 527 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 ALDH16A1Q8IZ83 802 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 ACTR6Q9GZN1 396 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 NSUN3Q9H649 340 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 DEC1Q9P2X7 70 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF451Q9Y4E5 1061 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 ASB3Q9Y575 518 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 KNDC1Q76NI1 1749 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 KIF1AQ12756 1690 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 C12orf71A8MTZ7 269 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 ANKRD66B4E2M5 251 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 DBIP07108 87 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 KCNA5P22460 613 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 CD97P48960 835 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 SP140Q13342 867 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 GRB7Q14451 532 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 VMACQ2NL98 169 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 REEP3Q6NUK4 255 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 FUT10Q6P4F1 479 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 KIAA1324Q6UXG2 1013 aaKnown RBP10.7□□□□□ -0.7
PBRM1-201ENST00000296302 LYSMD3Q7Z3D4 306 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 TTYH2Q9BSA4 534 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 H3BMQ9 156 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 KIAA0513O60268 411 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 SOX14O95416 240 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 PDHA2P29803 388 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 FAM189A2Q15884 450 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 HMBOX1Q6NT76 420 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 POMZP3Q6PJE2 187 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF767PQ75MW2 155 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 THOC6Q86W42 341 aaKnown RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 CMTR2Q8IYT2 770 aaKnown RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 Q8N402 240 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 NKD1Q969G9 470 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 COG8Q96MW5 612 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 SPATA9Q9BWV2 254 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 XKR8Q9H6D3 395 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 NLE1Q9NVX2 485 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 MAGED1Q9Y5V3 778 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 AFDNP55196 1824 aaKnown RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 TRAV6A0A075B6T7 132 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ELOA3DA6NLF2 546 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 B3GALT2O43825 422 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 CD1DP15813 335 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 NPRL3Q12980 569 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ELOA3BQ3SY89 546 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 UNC50Q53HI1 259 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ATAT1Q5SQI0 421 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ELOA3Q8NG57 546 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 GPR151Q8TDV0 419 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 THRSPQ92748 146 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 OSTF1Q92882 214 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 C12orf42Q96LP6 360 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 FAM129BQ96TA1 746 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ZSCAN5AQ9BUG6 496 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 WRAP53Q9BUR4 548 aaKnown RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 EXO5Q9H790 373 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 FOLH1BQ9HBA9 442 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 HTR3EA5X5Y0 456 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 J3QLW9 94 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 MRPS14O60783 128 aaKnown RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF19P17023 458 aa10.69□□□□□ -0.7
PBRM1-201ENST00000296302 MAPK3P27361 379 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-201ENST00000296302 GDF5P43026 501 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms