RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ADAMDEC1O15204 470 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SPNP16150 400 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 PRPS1L1P21108 318 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SERPINA4P29622 427 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 PPM1AP35813 382 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 IL12RB1P42701 662 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 PROX2Q3B8N5 592 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TBRG1Q3YBR2 411 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TMPRSS11BQ86T26 416 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 CSGALNACT1Q8TDX6 532 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 C1GALT1C1Q96EU7 318 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SLC30A2Q9BRI3 323 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 DNAJC27Q9NZQ0 273 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 ACSL6Q9UKU0 697 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 OARD1Q9Y530 152 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 ANKDD1BA6NHY2 528 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TTC34A8MYJ7 566 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TAPBPO15533 448 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TGM1P22735 817 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 CLCN7P51798 805 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF181Q2M3W8 571 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 C10orf62Q5T681 223 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TRIQKQ629K1 86 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TSPAN33Q86UF1 283 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 BEND7Q8N7W2 519 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 C7orf57Q8NEG2 295 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 FOPNLQ96NB1 174 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 PHOX2BQ99453 314 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 C2orf49Q9BVC5 232 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 MAGIXQ9H6Y5 334 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SLC52A3Q9NQ40 469 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SLC16A6O15403 523 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 CSF2RAP15509 400 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 PSMA1P25786 263 aaKnown RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 EIF2DP41214 584 aaKnown RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SGSHP51688 502 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SLC14A1Q13336 389 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 RRM2BQ7LG56 351 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 MSRB3Q8IXL7 192 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 VMP1Q96GC9 406 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 MGLLQ99685 303 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 CPPED1Q9BRF8 314 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 IL17CQ9P0M4 197 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 MRPS23Q9Y3D9 190 aaKnown RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 SYN3O14994 580 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 CPNE3O75131 537 aaKnown RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 CLTBP09497 229 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 CLCN4P51793 760 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 ALDH6A1Q02252 535 aaKnown RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF57Q68EA5 555 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 KLHL17Q6TDP4 642 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 PGBD3Q8N328 593 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 COL21A1Q96P44 957 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 POLR2J2Q9GZM3 115 aaKnown RBP12.95□□□□□ -0.34
SCAF4-201ENST00000286835 TRPC4Q9UBN4 977 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 VPS29Q9UBQ0 182 aa12.95□□□□□ -0.34
SCAF4-201ENST00000286835 FAM47E-STBD1D6RA91 191 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 GADD45GO95257 159 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 PRLP01236 227 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 EIF2S1P05198 315 aaKnown RBP12.94□□□□□ -0.34
SCAF4-201ENST00000286835 GJA1P17302 382 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 CA5AP35218 305 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 HNF4AP41235 474 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 PTPN5P54829 565 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ACVR1Q04771 509 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 SRSF11Q05519 484 aaKnown RBP12.94□□□□□ -0.34
SCAF4-201ENST00000286835 EXOC3L2Q2M3D2 409 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 BCL7AQ4VC05 210 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 PRSS36Q5K4E3 855 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 SYT6Q5T7P8 510 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-201ENST00000286835 NEK5Q6P3R8 708 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ADCK2Q7Z695 626 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 HJURPQ8NCD3 748 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-201ENST00000286835 NFKBIDQ8NI38 313 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 CCDC115Q96NT0 180 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 COQ7Q99807 217 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ISPDA4D126 451 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 CCL16O15467 120 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 IGSF6O95976 241 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 C1QCP02747 245 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 LAG3P18627 525 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 PPIGQ13427 754 aaKnown RBP eCLIP12.94□□□□□ -0.348e-9■■□□□ 13.7
SCAF4-201ENST00000286835 IFI44LQ53G44 452 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ASPNQ9BXN1 380 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 MMP28Q9H239 520 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 IL26Q9NPH9 171 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 TAS2R9Q9NYW1 312 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 CFL2Q9Y281 166 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 LYVE1Q9Y5Y7 322 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 LZTS3O60299 673 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-201ENST00000286835 PTHP01270 115 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 FHP07954 510 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ETFAP13804 333 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 PCMT1P22061 227 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 PAX3P23760 479 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms