RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 MEP1AQ16819 746 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 SCGB2B2Q4G0G5 96 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 KLHL26Q53HC5 615 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 SYVN1Q86TM6 617 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 ZNF101Q8IZC7 436 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 KCTD7Q96MP8 289 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 SMURF2Q9HAU4 748 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 ZBTB26Q9HCK0 441 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 PCDHGB7Q9Y5F8 929 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 COCHO43405 550 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 GRID2O43424 1007 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 CHRNA1P02708 482 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 HSD11B1P28845 292 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 PLGLB1Q02325 96 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 PDCD4Q53EL6 469 aaKnown RBP11.12□□□□□ -0.63
USP53-201ENST00000274030 RBM48Q5RL73 367 aaKnown RBP11.12□□□□□ -0.63
USP53-201ENST00000274030 GALNT10Q86SR1 603 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 CCDC36Q8IYA8 594 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 JAGN1Q8N5M9 183 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 HSPBAP1Q96EW2 488 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 MNTQ99583 582 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 DERL2Q9GZP9 239 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 SERINC1Q9NRX5 453 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 LCHNA4D1U4 455 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 ETV3P41162 512 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 KCNJ5P48544 419 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 TMEM115Q12893 351 aaPredicted RBP11.12□□□□□ -0.63
USP53-201ENST00000274030 ZNF792Q3KQV3 632 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 SLC15A3Q8IY34 581 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 TXNDC5Q8NBS9 432 aaKnown RBP11.12□□□□□ -0.63
USP53-201ENST00000274030 DOK4Q8TEW6 326 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 FCGR1BQ92637 280 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 KIAA1191Q96A73 305 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 PYURFQ96I23 114 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 NSUN5Q96P11 429 aaKnown RBP11.12□□□□□ -0.63
USP53-201ENST00000274030 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 LIN28AQ9H9Z2 209 aaKnown RBP11.12□□□□□ -0.63
USP53-201ENST00000274030 TMEM248Q9NWD8 314 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 PTTG2Q9NZH5 202 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 ZNF639Q9UID6 485 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 CDC14AQ9UNH5 594 aa11.12□□□□□ -0.63
USP53-201ENST00000274030 A0A1W2PP18 115 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 C9J4A7 227 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 PDCD5O14737 125 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 VILLO15195 856 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 CCNOP22674 350 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 MAZP56270 477 aaKnown RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 SNX29P2Q8IUI4 249 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 C12orf76Q8N812 135 aaPredicted RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 ZNF317Q96PQ6 595 aaPredicted RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 LYARQ9NX58 379 aaKnown RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 THUMPD1Q9NXG2 353 aaKnown RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 DNAJC27Q9NZQ0 273 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 J3QRK9 145 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 LEFTY1O75610 366 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OAS1P00973 400 aaKnown RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 SLC2A2P11168 524 aaPredicted RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 AGXTP21549 392 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 MATN1P21941 496 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 DDX1Q92499 740 aaKnown RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 FBXL8Q96CD0 374 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 UCK2Q9BZX2 261 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OR8D2Q9GZM6 311 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 KIF1AQ12756 1690 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 GMPRP36959 345 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 SLC30A8Q8IWU4 369 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 NPAS3Q8IXF0 933 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 KLHL6Q8WZ60 621 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 LRCH3Q96II8 777 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 TSSK6Q9BXA6 273 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 CD244Q9BZW8 370 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 Q9N2J8 555 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 ITGB1BP2Q9UKP3 347 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 POFUT2Q9Y2G5 429 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OR14I1A6ND48 311 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OAZ2O95190 189 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 IFI30P13284 250 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 ZNF30P17039 623 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 HK1P19367 917 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 SLC18A2Q05940 514 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 INCA1Q0VD86 236 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 ZNF678Q5SXM1 525 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OR8H3Q8N146 312 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 SDR16C5Q8N3Y7 309 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 GATSQ8NAP1 163 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 HCAR2Q8TDS4 363 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 CCDC120Q96HB5 630 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 TMEM59LQ9UK28 342 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 RBM47A0AV96 593 aaKnown RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 SMSP52788 366 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OR2B6P58173 313 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 PRRT3Q5FWE3 981 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 KLHDC10Q6PID8 442 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms