RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CDH18Q13634 790 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 L3MBTL4Q8NA19 623 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 OR9Q2Q8NGE9 314 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 FBXL12Q9NXK8 326 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 MTX2O75431 263 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 PRPH2P23942 346 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 UGT2B15P54855 530 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 GGTA1PQ4G0N0 100 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 TPGS1Q6ZTW0 290 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 CCDC80Q76M96 950 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 CCM2Q9BSQ5 444 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 DUSP26Q9BV47 211 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 MS4A12Q9NXJ0 267 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 KIAA0513O60268 411 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 AP1S1P61966 158 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 DOC2BQ14184 412 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 MED22Q15528 200 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 IL17RDQ8NFM7 739 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 DOHHQ9BU89 302 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 EMILIN2Q9BXX0 1053 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 ARHGAP39Q9C0H5 1083 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 OR51B4Q9Y5P0 310 aa26.51■■□□□ 1.83
CBX4-201ENST00000269397 CYP7B1O75881 506 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 HLA-EP13747 358 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 SLC6A12P48065 614 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 SPIBQ01892 262 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 VEZF1Q14119 521 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 SPANXN2Q5MJ10 180 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 C10orf62Q5T681 223 aaPredicted RBP26.5■■□□□ 1.83
CBX4-201ENST00000269397 MSANTD1Q6ZTZ1 278 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 SLC12A9Q9BXP2 914 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 PLCXD1Q9NUJ7 323 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 GABRR3A8MPY1 467 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 J3KTA2 159 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 AP3D1O14617 1153 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 IRF8Q02556 426 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 PLD1Q13393 1074 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 DMC1Q14565 340 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 HKDC1Q2TB90 917 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 FBXO22Q8NEZ5 403 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 COL21A1Q96P44 957 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 SDHCQ99643 169 aaPredicted RBP26.5■■□□□ 1.83
CBX4-201ENST00000269397 DNAJC11Q9NVH1 559 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 FKBP14Q9NWM8 211 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 GABRQQ9UN88 632 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 PCDHGA2Q9Y5H1 932 aa26.5■■□□□ 1.83
CBX4-201ENST00000269397 AOC2O75106 756 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 EIF2S1P05198 315 aaKnown RBP26.49■■□□□ 1.83
CBX4-201ENST00000269397 OR1D2P34982 312 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 ABRQ12979 859 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 RGNQ15493 299 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 EXOC3L2Q2M3D2 409 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 FAM26DQ5JW98 314 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 LYPLAL1Q5VWZ2 237 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 SERPINA13PQ6UXR4 307 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 ZNF852Q6ZMS4 543 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 B3GNT7Q8NFL0 401 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 FAM120CQ9NX05 1096 aaKnown RBP26.49■■□□□ 1.83
CBX4-201ENST00000269397 VPS29Q9UBQ0 182 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 CRATP43155 626 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 GPR33Q49SQ1 333 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 COX20Q5RI15 118 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 GATAD2AQ86YP4 633 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 LGI4Q8N135 537 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 OR8J2Q8NGG1 315 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 BCL7CQ8WUZ0 217 aaPredicted RBP26.49■■□□□ 1.83
CBX4-201ENST00000269397 ASB11Q8WXH4 323 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 GTPBP3Q969Y2 492 aaKnown RBP26.49■■□□□ 1.83
CBX4-201ENST00000269397 ASIC4Q96FT7 647 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 SLC22A12Q96S37 553 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 CEP44Q9C0F1 390 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 WDR70Q9NW82 654 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 IMPAD1Q9NX62 359 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 CCDC59Q9P031 241 aaKnown RBP26.49■■□□□ 1.83
CBX4-201ENST00000269397 CD84Q9UIB8 345 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 OGDHLQ9ULD0 1010 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 DUSP12Q9UNI6 340 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 PEX16Q9Y5Y5 336 aa26.49■■□□□ 1.83
CBX4-201ENST00000269397 A8MV72 311 aaPredicted RBP26.48■■□□□ 1.83
CBX4-201ENST00000269397 AGRPO00253 132 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 ETHE1O95571 254 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 HMGA1P17096 107 aaKnown RBP26.48■■□□□ 1.83
CBX4-201ENST00000269397 ACSM2AQ08AH3 577 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 TSTQ16762 297 aaKnown RBP26.48■■□□□ 1.83
CBX4-201ENST00000269397 XKR6Q5GH73 641 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 NXNL2Q5VZ03 156 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 ACSM2BQ68CK6 577 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 MMAAQ8IVH4 418 aaKnown RBP26.48■■□□□ 1.83
CBX4-201ENST00000269397 GPR156Q8NFN8 814 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 TRPM5Q9NZQ8 1165 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 GLTPD2A6NH11 291 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 SMAD3P84022 425 aaKnown RBP26.48■■□□□ 1.83
CBX4-201ENST00000269397 ZNF648Q5T619 568 aaPredicted RBP26.48■■□□□ 1.83
CBX4-201ENST00000269397 CRTC1Q6UUV9 634 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 NANOGNBQ7Z5D8 188 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 ALG14Q96F25 216 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 CHST8Q9H2A9 424 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 ZDHHC3Q9NYG2 299 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 SH3BP4Q9P0V3 963 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 PADI2Q9Y2J8 665 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms