RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 STRCQ7RTU9 1775 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 FAM189A1O60320 539 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 H1F0P07305 194 aaKnown RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 CCKBRP32239 447 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 SEPHS1P49903 392 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 TMEM44Q2T9K0 475 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 SLC9B2Q86UD5 537 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 GKN2Q86XP6 184 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 ZNF433Q8N7K0 673 aaPredicted RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 ARMC5Q96C12 935 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 PKP2Q99959 881 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 ATXN10Q9UBB4 475 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 B4GALT2O60909 372 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 PFKLP17858 780 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 HYAL2Q12891 473 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 IQCCQ4KMZ1 466 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 WDR45BQ5MNZ6 344 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 SYVN1Q86TM6 617 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 OR4K1Q8NGD4 311 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 BIRC7Q96CA5 298 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 TXLNGYQ9BZA5 131 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 MKKSQ9NPJ1 570 aaPredicted RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 DRGXA6NNA5 263 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 AURKAO14965 403 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 RSL1D1O76021 490 aaKnown RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 C8orf89P0DMQ9 161 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 C1GALT1C1LP0DN25 315 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 CEBPBP17676 345 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 MTTPP55157 894 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 CCNIQ14094 377 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 SPATS1Q496A3 300 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 UBAP2Q5T6F2 1119 aaKnown RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 SLC30A6Q6NXT4 461 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 CHCHD4Q8N4Q1 142 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 KAT8Q9H7Z6 458 aaKnown RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 PNO1Q9NRX1 252 aaKnown RBP14.91□□□□□ -0.02
TIMP3-201ENST00000266085 MAN2B2Q9Y2E5 1009 aa14.91□□□□□ -0.02
TIMP3-201ENST00000266085 FAM92AA1XBS5 289 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 STRCP1A6NGW2 1772 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 CAPN5O15484 640 aaPredicted RBP14.9□□□□□ -0.02
TIMP3-201ENST00000266085 PRMT3O60678 531 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 ATP5A1P25705 553 aaKnown RBP14.9□□□□□ -0.02
TIMP3-201ENST00000266085 ZNF789Q5FWF6 425 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 KDELC1Q6UW63 502 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 IKBIPQ70UQ0 350 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 ERMP1Q7Z2K6 904 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 TBL1XR1Q9BZK7 514 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 IL26Q9NPH9 171 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 CKLFQ9UBR5 152 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 NKX1-2Q9UD57 310 aaPredicted RBP14.9□□□□□ -0.02
TIMP3-201ENST00000266085 MYH7BA7E2Y1 1941 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 GLOD5A6NK44 160 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 MAGEB3O15480 346 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 TNFRSF21O75509 655 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 WBP4O75554 376 aaKnown RBP14.9□□□□□ -0.02
TIMP3-201ENST00000266085 SUOXP51687 545 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 FAM26DQ5JW98 314 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 PHF19Q5T6S3 580 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 MLIPQ5VWP3 458 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 ANKRD26P1Q6NSI1 321 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 CXorf57Q6NSI4 855 aaKnown RBP14.9□□□□□ -0.02
TIMP3-201ENST00000266085 FAM131AQ6UXB0 335 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 FRRS1Q6ZNA5 592 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 PHOSPHO2Q8TCD6 241 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 FCGR1BQ92637 280 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 FGF13Q92913 245 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 DGAT2Q96PD7 388 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 FZD3Q9NPG1 666 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 RPL36Q9Y3U8 105 aaKnown RBP14.9□□□□□ -0.02
TIMP3-201ENST00000266085 H0YC42 278 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 GNB5O14775 395 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 ADRB3P13945 408 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 LASP1Q14847 261 aaKnown RBP14.9□□□□□ -0.02
TIMP3-201ENST00000266085 KLHL22Q53GT1 634 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 NANOGP8Q6NSW7 305 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 OR56A1Q8NGH5 318 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 PYURFQ96I23 114 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 NDC1Q9BTX1 674 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 NANOGQ9H9S0 305 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 HCN3Q9P1Z3 774 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 PCDHGA2Q9Y5H1 932 aa14.9□□□□□ -0.02
TIMP3-201ENST00000266085 UBE2QL1A1L167 161 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 GRXCR1A8MXD5 290 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 C6orf47O95873 294 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 HMGN1P05114 100 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 FPR1P21462 350 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 C5AR1P21730 350 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 AHCYP23526 432 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 MNDAP41218 407 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 CDKN1CP49918 316 aaPredicted RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 ZNF542PQ5EBM4 170 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 KLHL24Q6TFL4 600 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 FAM180AQ6UWF9 173 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 KRT74Q7RTS7 529 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 NFKBIDQ8NI38 313 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 RNASE11Q8TAA1 199 aaKnown RBP14.89□□□□□ -0.03
TIMP3-201ENST00000266085 COQ7Q99807 217 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 REEP4Q9H6H4 257 aa14.89□□□□□ -0.03
TIMP3-201ENST00000266085 GDE1Q9NZC3 331 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms