RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 DEFB119Q8N690 84 aa12.21□□□□□ -0.45
PRPF6-201ENST00000266079 ALG9Q9H6U8 611 aa12.21□□□□□ -0.45
PRPF6-201ENST00000266079 MID1IP1Q9NPA3 183 aa12.21□□□□□ -0.45
PRPF6-201ENST00000266079 USE1Q9NZ43 259 aa12.21□□□□□ -0.45
PRPF6-201ENST00000266079 LEF1Q9UJU2 399 aaPredicted RBP12.21□□□□□ -0.45
PRPF6-201ENST00000266079 TSPAN11A1L157 253 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 SAGE2PA6NJ88 616 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 SCAMP1O15126 338 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 TBX1O43435 398 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 NOBOXO60393 691 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 PTTG1O95997 202 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 KRT8P05787 483 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 AKT1P31749 480 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 TRPC1P48995 793 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 SEPHS1P49903 392 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 DIO3P55073 304 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 FOXA1P55317 472 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 HERVK_113P63132 956 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 PPP2R2BQ00005 443 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 RCAN2Q14206 197 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 RAET1GQ6H3X3 334 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 MCFD2Q8NI22 146 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 ZNF566Q969W8 418 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 TSPAN17Q96FV3 270 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 ARPC5LQ9BPX5 153 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 ERVK-6Q9BXR3 956 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 TUBB1Q9H4B7 451 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 SLAMF8Q9P0V8 285 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 WNT16Q9UBV4 365 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 POLG2Q9UHN1 485 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 CYP8B1Q9UNU6 501 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 COL4A2P08572 1712 aa12.21□□□□□ -0.46
PRPF6-201ENST00000266079 LOC100130705A0A1B0GUX0 176 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 A0A1W2PQ67 120 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 TAF4O00268 1085 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 PPP6CO00743 305 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 WNT9AO14904 365 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 NIPSNAP2O75323 286 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 CCNKO75909 580 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 ADH1BP00325 375 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 ELP6Q0PNE2 266 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 KANK2Q63ZY3 851 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 DESI1Q6ICB0 168 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 ZNF549Q6P9A3 640 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 TUBA3EQ6PEY2 450 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 ATL1Q8WXF7 558 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 INTS7Q9NVH2 962 aaKnown RBP12.2□□□□□ -0.46
PRPF6-201ENST00000266079 OSGIN1Q9UJX0 560 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 CA5BQ9Y2D0 317 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 FADS2P1A8MWK0 482 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 NPC1O15118 1278 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 XPNPEP2O43895 674 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 KATNA1O75449 491 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 PCCBP05166 539 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 ANXA6P08133 673 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 CASP2P42575 452 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 ZFP36L2P47974 494 aaKnown RBP12.2□□□□□ -0.46
PRPF6-201ENST00000266079 CLCN5P51795 746 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 IST1P53990 364 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 CDKN2DP55273 166 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 PPP2CBP62714 309 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 PPP2CAP67775 309 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 NFKB2Q00653 900 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 CHRNEQ04844 493 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 CACNG1Q06432 222 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 FZD5Q13467 585 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 SETMARQ53H47 684 aaPredicted RBP12.2□□□□□ -0.46
PRPF6-201ENST00000266079 SYT6Q5T7P8 510 aaPredicted RBP12.2□□□□□ -0.46
PRPF6-201ENST00000266079 ZNF691Q5VV52 312 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 UBE2UQ5VVX9 321 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 PLA2G15Q8NCC3 412 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 MCOLN3Q8TDD5 553 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 TEX37Q96LM6 180 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 GALPQ9UBC7 116 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
PRPF6-201ENST00000266079 PRSS21Q9Y6M0 314 aa12.2□□□□□ -0.46
PRPF6-201ENST00000266079 A0A1W2PQU0 124 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 CCDC154A6NI56 674 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 LINC00032P0C843 101 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 ZNF30P17039 623 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 RYKP34925 604 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 MAP2K4P45985 399 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 TPMTP51580 245 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 ZNF284Q2VY69 593 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 ANKRD34AQ69YU3 496 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 DOK6Q6PKX4 331 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 ISCA2Q86U28 154 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 PLD3Q8IV08 490 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 DTWD1Q8N5C7 304 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 TSTD1Q8NFU3 115 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 LGALS12Q96DT0 336 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 RBM4BQ9BQ04 359 aaKnown RBP12.19□□□□□ -0.46
PRPF6-201ENST00000266079 RBM4Q9BWF3 364 aaKnown RBP12.19□□□□□ -0.46
PRPF6-201ENST00000266079 HDAC8Q9BY41 377 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 EXD2Q9NVH0 621 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 ERVK-18Q9QC07 812 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 DNAJB9Q9UBS3 223 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 TMPRSS11EQ9UL52 423 aa12.19□□□□□ -0.46
PRPF6-201ENST00000266079 N6AMT1Q9Y5N5 214 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms