RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 LPAL2Q16609 132 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 APIPQ96GX9 242 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 RSPH9Q9H1X1 276 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 DUSP12Q9UNI6 340 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 PCDHGB3Q9Y5G1 929 aa13.94□□□□□ -0.18
PDLIM2-201ENST00000265810 RPS7P62081 194 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 LRP8Q14114 963 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 DEFB134Q4QY38 66 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 PHF19Q5T6S3 580 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 FAM217AQ8IXS0 508 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 METTL21AQ8WXB1 218 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 POP5Q969H6 163 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 SLC7A6OSQ96CW6 309 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 TGM7Q96PF1 710 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 TSC22D3Q99576 134 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 FNDC11Q9BVV2 318 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 REEP4Q9H6H4 257 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 TM7SF3Q9NS93 570 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 C3orf18Q9UK00 162 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 C6orf47O95873 294 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 CCNYL3P0C7X3 344 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 UMPSP11172 480 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 SLC36A4Q6YBV0 504 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 MICU2Q8IYU8 434 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 LSMEM2Q8N112 164 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 OR7A2PQ8NGA2 310 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 FRS2Q8WU20 508 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 UHRF1Q96T88 793 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 MMP17Q9ULZ9 603 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 TMEM202A6NGA9 273 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 E2F3O00716 465 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 OR10H3O60404 316 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 IL3P08700 152 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 SRFP11831 508 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 HRH2P25021 359 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 CENPAP49450 140 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 ADPRHP54922 357 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 KIAA0895LQ68EN5 471 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 GRHL2Q6ISB3 625 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 CASP12Q6UXS9 341 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 ADAMTSL4Q6UY14 1074 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 ASPGQ86U10 573 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 SLC22A15Q8IZD6 547 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 IL17RCQ8NAC3 791 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 OR52E1Q8NGJ3 308 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 CANT1Q8WVQ1 401 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 NACC2Q96BF6 587 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 ATG2BQ96BY7 2078 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 ECHDC3Q96DC8 303 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 RMND5BQ96G75 393 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 TIMM29Q9BSF4 260 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 LCTP09848 1927 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 PTGES3LE9PB15 166 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 IFNGR2P38484 337 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 FCHO2Q0JRZ9 810 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 HSF5Q4G112 596 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 NANOGP8Q6NSW7 305 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 BLOC1S3Q6QNY0 202 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 TRIM73Q86UV7 250 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 FAM20CQ8IXL6 584 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 MSANTD3Q96H12 275 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 GPR78Q96P69 363 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 INSM2Q96T92 566 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 APOL4Q9BPW4 351 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 NTMT1Q9BV86 223 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 CHID1Q9BWS9 393 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 NANOGQ9H9S0 305 aa13.93□□□□□ -0.18
PDLIM2-201ENST00000265810 G3V2T6 193 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 hCG_2039718K7EN88 272 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 ARPC2O15144 300 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 B4GALT2O60909 372 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 CLPTM1O96005 669 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 CD38P28907 300 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 NOS3P29474 1203 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 PUS10Q3MIT2 529 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 IRAK1BP1Q5VVH5 260 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 GATAD2AQ86YP4 633 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 TSPEARQ8WU66 669 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 TMEM168Q9H0V1 697 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 TRAP1Q12931 704 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 SPRED3Q2MJR0 410 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 METTL2BQ6P1Q9 378 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 USP30Q70CQ3 517 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 PDP2Q9P2J9 529 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 GTPBP1O00178 669 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 ID2Q02363 134 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 ADCY4Q8NFM4 1077 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 OR52J3Q8NH60 311 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 PLAC1Q9HBJ0 212 aa13.92□□□□□ -0.18
PDLIM2-201ENST00000265810 DFNA5O60443 496 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 NDUFV2P19404 249 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 DEFB133Q30KQ1 61 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 TTC23Q5W5X9 447 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 CAMKK1Q8N5S9 505 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 NATD1Q8N6N6 113 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 ZDHHC12Q96GR4 267 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 MRGPRX3Q96LB0 322 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 GAL3ST4Q96RP7 486 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 ENOPH1Q9UHY7 261 aa13.91□□□□□ -0.18
PDLIM2-201ENST00000265810 DMTF1Q9Y222 760 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms