RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 CFIP05156 583 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 PRSS56P0CW18 603 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 C1GALT1C1LP0DN25 315 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 VIPR2P41587 438 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 ALDH3A2P51648 485 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 MADCAM1Q13477 382 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 IL18R1Q13478 541 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 LASP1Q14847 261 aaKnown RBP13.54□□□□□ -0.24
CDH3-201ENST00000264012 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 PDSS2Q86YH6 399 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 SIX5Q8N196 739 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 MGME1Q9BQP7 344 aa13.54□□□□□ -0.24
CDH3-201ENST00000264012 TAF4O00268 1085 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 CAPN5O15484 640 aaPredicted RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 KLF8O95600 359 aaPredicted RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 BCKDHAP12694 445 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 CCKBRP32239 447 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 DHPSP49366 369 aaPredicted RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 RPS21P63220 83 aaKnown RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 TIGD6Q17RP2 521 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 NADK2Q4G0N4 442 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 LCN1P1Q5VSP4 162 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ISCA2Q86U28 154 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 TSPAN33Q86UF1 283 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ZFAND4Q86XD8 727 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 OR52B6Q8NGF0 335 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 AIG1Q9NVV5 245 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ZNF222Q9UK12 451 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ACTL7AQ9Y615 435 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ELOA3DA6NLF2 546 aaPredicted RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 TLR4O00206 839 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 SNNO75324 88 aaPredicted RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 SNX4O95219 450 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 GSTM3P21266 225 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 PRKACGP22612 351 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ELOA3BQ3SY89 546 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 UTS2BQ765I0 119 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ATCAYQ86WG3 371 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ELOA3Q8NG57 546 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 UFD1Q92890 307 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 RELTQ969Z4 430 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 TRNT1Q96Q11 434 aaKnown RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 R3HDMLQ9H3Y0 253 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 FARSBQ9NSD9 589 aaKnown RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 MTMR10Q9NXD2 777 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 NENFQ9UMX5 172 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 SPO11Q9Y5K1 396 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 GPC6Q9Y625 555 aaPredicted RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 LOC100130705A0A1B0GUX0 176 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 GLOD5A6NK44 160 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 PRMT3O60678 531 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 CD36P16671 472 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 SPINT3P49223 89 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 GRHL3Q8TE85 626 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 SHDQ96IW2 340 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 TBL1XR1Q9BZK7 514 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 TRIM8Q9BZR9 551 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 DAPL1A0PJW8 107 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 TOR1BO14657 336 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 DFNA5O60443 496 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 PSIP1O75475 530 aaKnown RBP13.53□□□□□ -0.24
CDH3-201ENST00000264012 TYRP1P17643 537 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 SHMT2P34897 504 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 ABRAXAS2Q15018 415 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 SYT16Q17RD7 645 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 KIAA1161Q6NSJ0 714 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 OR8J3Q8NGG0 315 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 SCRN2Q96FV2 425 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 OR2M4Q96R27 311 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 NKIRAS2Q9NYR9 191 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 COMMD9Q9P000 198 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 DNAJC15Q9Y5T4 150 aa13.53□□□□□ -0.24
CDH3-201ENST00000264012 IQCMA0A1B0GVH7 501 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 EFCAB9A8MZ26 197 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 C8BP07358 591 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 ATP5A1P25705 553 aaKnown RBP13.52□□□□□ -0.24
CDH3-201ENST00000264012 PRRT3Q5FWE3 981 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 PHF24Q9UPV7 400 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 VEGFDO43915 354 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 POLR2CP19387 275 aaPredicted RBP13.52□□□□□ -0.24
CDH3-201ENST00000264012 NTHL1P78549 312 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 ADGRD2Q7Z7M1 963 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 KBTBD6Q86V97 674 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 RNF31Q96EP0 1072 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 PRR11Q96HE9 360 aaPredicted RBP13.52□□□□□ -0.24
CDH3-201ENST00000264012 BOCQ9BWV1 1114 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 RPF2Q9H7B2 306 aaKnown RBP13.52□□□□□ -0.24
CDH3-201ENST00000264012 CSNK1G1Q9HCP0 422 aa13.52□□□□□ -0.24
CDH3-201ENST00000264012 B4GALT2O60909 372 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 COQ9O75208 318 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 GRIA2P42262 883 aa13.52□□□□□ -0.25
CDH3-201ENST00000264012 ZNF789Q5FWF6 425 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms