RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 HMBSP08397 361 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 FAPQ12884 760 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 SLAMF1Q13291 335 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 BOP1Q14137 746 aaKnown RBP11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 ELOAQ14241 798 aaKnown RBP11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 BAK1Q16611 211 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 C10orf120Q5SQS8 335 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC35F1Q5T1Q4 408 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 CCNJQ5T5M9 372 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 MIB1Q86YT6 1006 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 ZBTB2Q8N680 514 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 TTC16Q8NEE8 873 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 SPPL2AQ8TCT8 520 aa11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 ABI2Q9NYB9 513 aaPredicted RBP11.96□□□□□ -0.49
CHMP2B-201ENST00000263780 PATJQ8NI35 1801 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 OR6C70A6NIJ9 312 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 ZNF780AO75290 641 aaPredicted RBP11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 CCNB2O95067 398 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 IGLV3-27P01718 113 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 CPN2P22792 545 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 PCGF2P35227 344 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 RPS19P39019 145 aaKnown RBP11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 KCNQ1P51787 676 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 SELENOWP63302 87 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 MRPS6P82932 125 aaKnown RBP11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 DAB2P98082 770 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 HYAL2Q12891 473 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 TRIM71Q2Q1W2 868 aaKnown RBP11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 FAM131AQ6UXB0 335 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 LRRC70Q7Z2Q7 622 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 GALNT10Q86SR1 603 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 VPS37AQ8NEZ2 397 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 OR8J2Q8NGG1 315 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 OR5M11Q96RB7 305 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 ROGDIQ9GZN7 287 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 FAM83DQ9H4H8 585 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 SSR3Q9UNL2 185 aa11.96□□□□□ -0.5
CHMP2B-201ENST00000263780 ZSCAN5BA6NJL1 495 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 ZNF670-ZNF695F2Z2N8 137 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 ERVH48-1M5A8F1 160 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 LRATO95237 230 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 SLC25A14O95258 325 aaPredicted RBP11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CPSF4O95639 269 aaKnown RBP11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CHMP24386 653 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TACR1P25103 407 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CSTF2P33240 577 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 RGRP47804 291 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CRISP3P54108 245 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TUSC3Q13454 348 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TNK1Q13470 666 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 ARHGEF7Q14155 803 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 MEDAGQ5VYS4 303 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 NOXRED1Q6NXP6 359 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CREB3L2Q70SY1 520 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 GPR155Q7Z3F1 870 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 SYT12Q8IV01 421 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 LGI4Q8N135 537 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 C11orf65Q8NCR3 313 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 ENKURQ8TC29 256 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 GPR63Q9BZJ6 419 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 MMP28Q9H239 520 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TPT1P8Q9HAU6 139 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 NDUFAF4Q9P032 175 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 IL17CQ9P0M4 197 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TRPV2Q9Y5S1 764 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CFAP20Q9Y6A4 193 aaKnown RBP11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 A0A0D9SEW6 157 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 LOC105371267A0A1B0GV96 52 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 B4DXG7 233 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TLR5O60602 858 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TMCC2O75069 709 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 LGI1O95970 557 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CBSLP0DN79 551 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 COX7A2P14406 83 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 AMD1P17707 334 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CBSP35520 551 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 GZMKP49863 264 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CDH4P55283 916 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 RAB25P57735 213 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CD83Q01151 205 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 SPIBQ01892 262 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 ZNF33BQ06732 778 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 DSC3Q14574 896 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 ZNF79Q15937 498 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 SSX1Q16384 188 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 C5orf22Q49AR2 442 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 IFI44LQ53G44 452 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CD300LGQ6UXG3 332 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 PTCHD4Q6ZW05 846 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 OR7D4Q8NG98 312 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 OR4C15Q8NGM1 316 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 UBASH3BQ8TF42 649 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 BTN2A2Q8WVV5 523 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 FYTTD1Q96QD9 318 aaKnown RBP11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 TIGARQ9NQ88 270 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 ING3Q9NXR8 418 aa11.95□□□□□ -0.5
CHMP2B-201ENST00000263780 CPA4Q9UI42 421 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms