RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 GPR155Q7Z3F1 870 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 PLA2G15Q8NCC3 412 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 PJA1Q8NG27 643 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 OR5K1Q8NHB7 308 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 CHFRQ96EP1 664 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 IL17FQ96PD4 163 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 RBM4BQ9BQ04 359 aaKnown RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 RBM4Q9BWF3 364 aaKnown RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 ADNPQ9H2P0 1102 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 VPS4AQ9UN37 437 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 EXO1Q9UQ84 846 aaKnown RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 F5P12259 2224 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 LRRK1Q38SD2 2015 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 COL4A3Q01955 1670 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 EDDM13A0A1B0GTR0 161 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 MITFO75030 526 aaPredicted RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 POP7O75817 140 aaKnown RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 ABCB1P08183 1280 aaPredicted RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 GPX2P18283 190 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 HLCSP50747 726 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 ELAVL3Q14576 367 aaKnown RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 MEP1AQ16819 746 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 IER5LQ5T953 404 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 THAP5Q7Z6K1 395 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 TMIEQ8NEW7 156 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 MAL2Q969L2 176 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 EPHX3Q9H6B9 360 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 TPT1P8Q9HAU6 139 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 ETAA1Q9NY74 926 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 USE1Q9NZ43 259 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 TMEFF2Q9UIK5 374 aaPredicted RBP18■□□□□ 0.47
PDLIM4-201ENST00000253754 KIAA1549LQ6ZVL6 1849 aa18■□□□□ 0.47
PDLIM4-201ENST00000253754 PCDH7O60245 1069 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 HSD3B1P14060 373 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 HSD3B2P26439 372 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 MAGEA2P43356 314 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 GTF2H3Q13889 308 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 CCDC85BQ15834 202 aaPredicted RBP17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 CTU2Q2VPK5 515 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 LRIT3Q3SXY7 679 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 ZNF385BQ569K4 471 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 CEP68Q76N32 757 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 GALNT5Q7Z7M9 940 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 C8orf59Q8N0T1 100 aaPredicted RBP17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 ZNF740Q8NDX6 193 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 MSLNLQ96KJ4 702 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 NAA50Q9GZZ1 169 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 OR51B5Q9H339 312 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 CXorf21Q9HAI6 301 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 SH3BP4Q9P0V3 963 aa17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 SAMD4AQ9UPU9 718 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-201ENST00000253754 MGAT4DA6NG13 374 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 KAT7O95251 611 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 TGFB1P01137 390 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 NTRK1P04629 796 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 IDSP22304 550 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 TIA1P31483 386 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 SH3BGRP55822 239 aaPredicted RBP17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 TAP2Q03519 686 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 PCDH1Q08174 1060 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 ELP6Q0PNE2 266 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 ITPRIPL2Q3MIP1 535 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 AP1ARQ63HQ0 302 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 ARMCX6Q7L4S7 300 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 OR4K1Q8NGD4 311 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 ZCCHC2Q9C0B9 1178 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 TRIM39Q9HCM9 518 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 PCDHB11Q9Y5F2 797 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 IL1RNP18510 177 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 AQP1P29972 269 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 KDELR2P33947 212 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 SOX9P48436 509 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 HNRNPFP52597 415 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 TPD52P55327 224 aaPredicted RBP17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 C21orf58P58505 322 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 VLDLRP98155 873 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 SPIN4Q56A73 249 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 GPR107Q5VW38 600 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 CPZQ66K79 652 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 R3HCC1LQ7Z5L2 792 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 ZNF555Q8NEP9 628 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 OR9A1PQ8NGU1 263 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 WDR48Q8TAF3 677 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 C12orf43Q96C57 262 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 TMEM245Q9H330 911 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 FZD4Q9ULV1 537 aa17.98■□□□□ 0.47
PDLIM4-201ENST00000253754 C1orf226A1L170 272 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 PIPSLA2A3N6 862 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 MYO1GB0I1T2 1018 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 AGXTP21549 392 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 IL12RB1P42701 662 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 MC1RQ01726 317 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 PIGFQ07326 219 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 E2F2Q14209 437 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 TTC23Q5W5X9 447 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 LAIR2Q6ISS4 152 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 ZNF852Q6ZMS4 543 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 TMEM26Q6ZUK4 368 aa17.97■□□□□ 0.47
PDLIM4-201ENST00000253754 COMMD6Q7Z4G1 85 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms