RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CARS2Q9HA77 564 aaKnown RBP12.7□□□□□ -0.38
SLIRP-201ENST00000238688 RNPEPL1Q9HAU8 725 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 FGF22Q9HCT0 170 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 AHSPQ9NZD4 102 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 OR6C2Q9NZP2 312 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 ABCD2Q9UBJ2 740 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 SUCOQ9UBS9 1254 aaKnown RBP12.7□□□□□ -0.38
SLIRP-201ENST00000238688 SLC7A8Q9UHI5 535 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 G3BP2Q9UN86 482 aaKnown RBP12.7□□□□□ -0.38
SLIRP-201ENST00000238688 PTGDR2Q9Y5Y4 395 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 ADAMTS20P59510 1910 aa12.7□□□□□ -0.38
SLIRP-201ENST00000238688 POM121BA6NF01 834 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 NR5A2O00482 541 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 TRIM38O00635 465 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 FFAR3O14843 346 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 GPR42O15529 346 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 TNFSF14O43557 240 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 RASGRP1O95267 797 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 STAMBPO95630 424 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 ME2P23368 584 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 PKLRP30613 574 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 CCR8P51685 355 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 SRP54P61011 504 aaKnown RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 PSME3P61289 254 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 SRSF11Q05519 484 aaKnown RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 ACSM2AQ08AH3 577 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 ILF3Q12906 894 aaKnown RBP eCLIP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 PLA2G4EQ3MJ16 856 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 RFTN2Q52LD8 501 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 TCHHL1Q5QJ38 904 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 THEMIS2Q5TEJ8 643 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 C1orf146Q5VVC0 180 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 IRAK1BP1Q5VVH5 260 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 FBXW10Q5XX13 1052 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 ACSM2BQ68CK6 577 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 ZFP1Q6P2D0 407 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 OR7G3Q8NG95 312 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 OR5AR1Q8NGP9 310 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 FBXO27Q8NI29 283 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 ZCCHC14Q8WYQ9 949 aaKnown RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 KLK6Q92876 244 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 ASB9Q96DX5 294 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 C11orf24Q96F05 449 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 MARK4Q96L34 752 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 SH3GL1Q99961 368 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 GPATCH1Q9BRR8 931 aaKnown RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 CENPKQ9BS16 269 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 MENTQ9BUN1 341 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 SARGQ9BW04 601 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 GSDMCQ9BYG8 508 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 DPY30Q9C005 99 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 RHBGQ9H310 441 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 OSGEPL1Q9H4B0 414 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 CLMPQ9H6B4 373 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 SLC52A3Q9NQ40 469 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 BAIAP2L1Q9UHR4 511 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 GPSM3Q9Y4H4 160 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 PCDHB11Q9Y5F2 797 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 DSPP15924 2871 aaKnown RBP12.69□□□□□ -0.38
SLIRP-201ENST00000238688 CROCCQ5TZA2 2017 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 RP1P56715 2156 aa12.69□□□□□ -0.38
SLIRP-201ENST00000238688 LAMA5O15230 3695 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 CELSR3Q9NYQ7 3312 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 KIR2DS5A0A0G2JLQ3 304 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 A0A0G2JNG1 304 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 SPTY2D1-AS1A0A0U1RR47 76 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 PDZK1P1A8MUH7 402 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 KIR2DS3K7RE56 304 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 FBP2O00757 339 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 TNFP01375 233 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 G6PDP11413 515 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 BCKDHAP12694 445 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 F3P13726 295 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 HSD17B1P14061 328 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 AMD1P17707 334 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 PTX3P26022 381 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-201ENST00000238688 BNIP2Q12982 314 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 CAMK2BQ13554 666 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 KRT33BQ14525 404 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 KIR2DS5Q14953 304 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 RPE65Q16518 533 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 CCSMST1Q4G0I0 132 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 ENPP7Q6UWV6 458 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 TMPRSS11BQ86T26 416 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 FAM129CQ86XR2 697 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 NATD1Q8N6N6 113 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 OR4K1Q8NGD4 311 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 FERD3LQ96RJ6 166 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 INSM2Q96T92 566 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-201ENST00000238688 PRPF18Q99633 342 aaKnown RBP12.68□□□□□ -0.38
SLIRP-201ENST00000238688 RMND5AQ9H871 391 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 POT1Q9NUX5 634 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 GEMIN8Q9NWZ8 242 aaKnown RBP12.68□□□□□ -0.38
SLIRP-201ENST00000238688 TMEM181Q9P2C4 612 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 ANKMY1Q9P2S6 941 aa12.68□□□□□ -0.38
SLIRP-201ENST00000238688 STX18Q9P2W9 335 aaKnown RBP12.68□□□□□ -0.38
SLIRP-201ENST00000238688 RALYQ9UKM9 306 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms