RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ASPHQ12797 758 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 CHI3L2Q15782 390 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 MED27Q6P2C8 311 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 VN1R5Q7Z5H4 357 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 DTWD1Q8N5C7 304 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 KCT2Q8NC54 265 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 OR7G3Q8NG95 312 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 MTFMTQ96DP5 389 aaKnown RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 THAP11Q96EK4 314 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ZNF382Q96SR6 550 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ULBP3Q9BZM4 244 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 NT5DC2Q9H857 520 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 MID1IP1Q9NPA3 183 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 CELSR3Q9NYQ7 3312 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 NDUFS4O43181 175 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 DXOO77932 396 aaKnown RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 MED26O95402 600 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 CHRNGP07510 517 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 NEFHP12036 1026 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ARRB2P32121 409 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 AHRP35869 848 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 NEK2P51955 445 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 PPP2R2AP63151 447 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ZRSR2Q15696 482 aaKnown RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 TLDC1Q6P9B6 456 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 IGF2-ASQ6U949 168 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 GPRIN3Q6ZVF9 776 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 LAS2Q8IYD9 372 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 CDYL2Q8N8U2 506 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 OR6Y1Q8NGX8 325 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 PPP1R14CQ8TAE6 165 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 CREB3L4Q8TEY5 395 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 AGAP11Q8TF27 550 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 SREK1Q8WXA9 508 aaKnown RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 CCT6BQ92526 530 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 CNDP1Q96KN2 507 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 TEFMQ96QE5 360 aaKnown RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 KCNA7Q96RP8 456 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ZPBPQ9BS86 351 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ZNF395Q9H8N7 513 aaPredicted RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 PRM3Q9NNZ6 103 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 TNFRSF12AQ9NP84 129 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 DHCR7Q9UBM7 475 aaKnown RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 NCOR2Q9Y618 2525 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 HYKKA2RU49 373 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 ANKDD1BA6NHY2 528 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 H3BQF6 201 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 STK17BO94768 372 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 DDX39BQ13838 428 aaKnown RBP14.3□□□□□ -0.12
RPA3-201ENST00000223129 GRM7Q14831 915 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 PRTGQ2VWP7 1150 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 HSP90B2PQ58FF3 399 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 TCHHL1Q5QJ38 904 aaPredicted RBP14.3□□□□□ -0.12
RPA3-201ENST00000223129 ZFAND4Q86XD8 727 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 CAMKVQ8NCB2 501 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 CLIP3Q96DZ5 547 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 SLC7A5P2Q9GIP4 190 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 PITHD1Q9GZP4 211 aaPredicted RBP14.3□□□□□ -0.12
RPA3-201ENST00000223129 DRC3Q9H069 523 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 ACTR5Q9H9F9 607 aaPredicted RBP14.3□□□□□ -0.12
RPA3-201ENST00000223129 MRPS2Q9Y399 296 aaKnown RBP14.3□□□□□ -0.12
RPA3-201ENST00000223129 TIMM22Q9Y584 194 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 PCDHGA7Q9Y5G6 932 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 SDK2Q58EX2 2172 aa14.3□□□□□ -0.12
RPA3-201ENST00000223129 FITM1A5D6W6 292 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 H0YIV9 168 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 NPHS1O60500 1241 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 SH3BGRLO75368 114 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 ESRRBO95718 433 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 TBX6O95947 436 aaPredicted RBP14.29□□□□□ -0.12
RPA3-201ENST00000223129 CAPN1P07384 714 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 CHN1P15882 459 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 ALAS2P22557 587 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 FOXA1P55317 472 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 NAA20P61599 178 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 HYAL2Q12891 473 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 ARL13AQ5H913 290 aaPredicted RBP14.29□□□□□ -0.12
RPA3-201ENST00000223129 TTC19Q6DKK2 380 aaPredicted RBP14.29□□□□□ -0.12
RPA3-201ENST00000223129 TTLL10Q6ZVT0 673 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 TTC29Q8NA56 475 aaPredicted RBP14.29□□□□□ -0.12
RPA3-201ENST00000223129 TRPV3Q8NET8 790 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 HUS1BQ8NHY5 278 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 MTERF1Q99551 399 aaKnown RBP14.29□□□□□ -0.12
RPA3-201ENST00000223129 NDC1Q9BTX1 674 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 SPRY4Q9C004 299 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 RHBGQ9H310 441 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 KLHL31Q9H511 634 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 AKIRIN1Q9H9L7 192 aaPredicted RBP14.29□□□□□ -0.12
RPA3-201ENST00000223129 CUTCQ9NTM9 273 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 TRPS1Q9UHF7 1281 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 PCDHB3Q9Y5E6 796 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 PCDHGA11Q9Y5H2 935 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 ITM2AO43736 263 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 LYPLA1O75608 230 aaPredicted RBP14.29□□□□□ -0.12
RPA3-201ENST00000223129 SLC35G6P0C7Q6 338 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 NR1D1P20393 614 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 GCGRP47871 477 aa14.29□□□□□ -0.12
RPA3-201ENST00000223129 PKNOX1P55347 436 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms