RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ADAMTS3O15072 1205 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MSI1O43347 362 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 SNX4O95219 450 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FMO3P31513 532 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC6A6P31641 620 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MRPS10P82664 201 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 OGDHQ02218 1023 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GAD2Q05329 585 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TMEM35AQ53FP2 167 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RAB41Q5JT25 222 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PRAMEF17Q5VTA0 474 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CHRDL2Q6WN34 429 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GOLGA7Q7Z5G4 137 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CAND1Q86VP6 1230 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 AQP11Q8NBQ7 271 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLAIN1Q8ND83 568 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GPR150Q8NGU9 434 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 OR2AJ1Q8NGZ0 328 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SUN3Q8TAQ9 357 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 METTL21AQ8WXB1 218 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GTPBP3Q969Y2 492 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 CORO1BQ9BR76 489 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ADAM7Q9H2U9 754 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TPK1Q9H3S4 243 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PTPRHQ9HD43 1115 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 B3GAT2Q9NPZ5 323 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 INPP5EQ9NRR6 644 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 NUDT15Q9NV35 164 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 DEC1Q9P2X7 70 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CYTH4Q9UIA0 394 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CDC14AQ9UNH5 594 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PRELID1Q9Y255 219 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TRAPPC13A5PLN9 417 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 hCG_2039718K7EN88 272 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CAPN5O15484 640 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 ADH1BP00325 375 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 HTR2AP28223 471 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 S100A2P29034 98 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 VIPR1P32241 457 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PPP5CP53041 499 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 C1QTNF8P60827 252 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC10A7Q0GE19 358 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RAPSNQ13702 412 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CCINQ13939 588 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ARL6IP1Q15041 203 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SOWAHAQ2M3V2 549 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FAM76BQ5HYJ3 339 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PRAMEF14Q5SWL7 426 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PRAMEF13Q5VWM6 474 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 DCUN1D3Q8IWE4 304 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RASGEF1AQ8N9B8 481 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ZNF675Q8TD23 568 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CDKN2AIPNLQ96HQ2 116 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SIGLEC10Q96LC7 697 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FAM129BQ96TA1 746 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 NPY6RQ99463 290 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SMAD5Q99717 465 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 POTEKPQ9BYX7 375 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TBC1D17Q9HA65 648 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FAIMQ9NVQ4 179 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PAK1IP1Q9NWT1 392 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 NDOR1Q9UHB4 597 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 NUP214P35658 2090 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 IRS2Q9Y4H2 1338 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 NOTOA8MTQ0 251 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 E2F3O00716 465 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PRAMEF11O60813 436 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GNAO1P09471 354 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ATF4P18848 351 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 TSPAN8P19075 237 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 IL1R2P27930 398 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CD52P31358 61 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GRK5P34947 590 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ACTR1BP42025 376 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ACTBP60709 375 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ACTG1P63261 375 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CYCSP99999 105 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 C4orf46Q504U0 113 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 HSDL2Q6YN16 418 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ASB18Q6ZVZ8 466 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 UBQLNLQ8IYU4 475 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SCML4Q8N228 414 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 WDR48Q8TAF3 677 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PSMG2Q969U7 264 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TM6SF2Q9BZW4 377 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 BRD7Q9NPI1 651 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RYDENQ9NUL5 291 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 PCDHB11Q9Y5F2 797 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MAU2Q9Y6X3 613 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 LTBP3Q9NS15 1303 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SCN5AQ14524 2016 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 HYKKA2RU49 373 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 H0Y858 1186 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MMP20O60882 483 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RNASEH2AO75792 299 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 ITGB1P05556 798 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ZNF20P17024 532 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 WEE1P30291 646 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RYKP34925 604 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms