RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	STATH	P02808	62 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	PDGFA	P04085	211 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	ZGLP1	P0C6A0	271 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	SLC26A3	P40879	764 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	BCL6	P41182	706 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	RAB10	P61026	200 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	KLRB1	Q12918	225 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	CSHL1	Q14406	222 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	DCAF10	Q5QP82	559 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	THOC6	Q86W42	341 aa	Known RBP	14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	FDCSP	Q8NFU4	85 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	SLC5A11	Q8WWX8	675 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	NEIL2	Q969S2	332 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	TM4SF19	Q96DZ7	209 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	CRB3	Q9BUF7	120 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	SARG	Q9BW04	601 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	UNK	Q9C0B0	810 aa	Known RBP	14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	TSPYL1	Q9H0U9	437 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	SEMA3G	Q9NS98	782 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	TRPC4	Q9UBN4	977 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	DYRK1B	Q9Y463	629 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939	TENM4	Q6N022	2769 aa		14.29	□□□□□ -0.12
PHGDH-231	ENST00000641939		A0A0A6YYC8	382 aa	Predicted RBP	14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939		I3L1I5	382 aa	Predicted RBP	14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	SOCS6	O14544	535 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	LCMT2	O60294	686 aa	Known RBP	14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	CD1D	P15813	335 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	PHB	P35232	272 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	CASR	P41180	1078 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	AVPR1B	P47901	424 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	ATP6V0D1	P61421	351 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	MEF2A	Q02078	507 aa	Predicted RBP	14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	KLC1	Q07866	573 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	SLMAP	Q14BN4	828 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	EFTUD2	Q15029	972 aa	Known RBP eCLIP	14.28	□□□□□ -0.12	1e-6	■■■■□ 25.8
PHGDH-231	ENST00000641939	TGFBI	Q15582	683 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	RBBP7	Q16576	425 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	VWA2	Q5GFL6	755 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	CATSPERE	Q5SY80	951 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	ASPG	Q86U10	573 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	RELL1	Q8IUW5	271 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	SPATA6L	Q8N4H0	392 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	TBC1D19	Q8N5T2	526 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	AMER3	Q8N944	861 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	TEX19	Q8NA77	164 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	MFSD9	Q8NBP5	474 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	SLC13A3	Q8WWT9	602 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	IFT81	Q8WYA0	676 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	UBXN10	Q96LJ8	280 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	TSNARE1	Q96NA8	513 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	MACROD1	Q9BQ69	325 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	YIPF2	Q9BWQ6	316 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	PELI2	Q9HAT8	420 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	MKKS	Q9NPJ1	570 aa	Predicted RBP	14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	GPR83	Q9NYM4	423 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	NINJ2	Q9NZG7	142 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	FBXL4	Q9UKA2	621 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	SLC22A14	Q9Y267	594 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	MRPS2	Q9Y399	296 aa	Known RBP	14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	ZNF451	Q9Y4E5	1061 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	MAP4K5	Q9Y4K4	846 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	PCDHGB7	Q9Y5F8	929 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	HS3ST3B1	Q9Y662	390 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	KCNE2	Q9Y6J6	123 aa		14.28	□□□□□ -0.12
PHGDH-231	ENST00000641939	TRBC2	A0A5B9	178 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	NCF1B	A6NI72	391 aa	Predicted RBP	14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	NCF1C	A8MVU1	366 aa	Predicted RBP	14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	OR1F1	O43749	312 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	NSA2	O95478	260 aa	Known RBP	14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLC35G6	P0C7Q6	338 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	NCF1	P14598	390 aa	Predicted RBP	14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	CRABP2	P29373	138 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLC6A12	P48065	614 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	OR4D1	Q15615	310 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	CDKL4	Q5MAI5	379 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	TMEM214	Q6NUQ4	689 aa	Known RBP	14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	KIRREL2	Q6UWL6	708 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	RAPH1	Q70E73	1250 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	CMC1	Q7Z7K0	106 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	GPSM1	Q86YR5	675 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	PRSS58	Q8IYP2	241 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	GALNT16	Q8N428	558 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	CEP112	Q8N8E3	955 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	OR9A4	Q8NGU2	314 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	RHBDF1	Q96CC6	855 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	VPS50	Q96JG6	964 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	CYTH2	Q99418	400 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	FMO2	Q99518	471 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	NUDT9	Q9BW91	350 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	TGIF2	Q9GZN2	237 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	ATP13A2	Q9NQ11	1180 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	C14orf105	Q9NVL8	296 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939	C3orf18	Q9UK00	162 aa		14.27	□□□□□ -0.13
PHGDH-231	ENST00000641939		H0YIG0	161 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	FFAR3	O14843	346 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	GPR42	O15529	346 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	KLHL41	O60662	606 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	WDR47	O94967	919 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLC35E2B	P0CK96	405 aa		14.26	□□□□□ -0.13
PHGDH-231	ENST00000641939	SNRPN	P63162	240 aa	Known RBP	14.26	□□□□□ -0.13

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