RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.75■□□□□ 0.275e-6■■■■■ 81.8
PHGDH-230ENST00000641927 LAS2Q8IYD9 372 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 RNF175Q8N4F7 328 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 DEFB124Q8NES8 71 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 OR4D9Q8NGE8 314 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 HUS1BQ8NHY5 278 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 WDR20Q8TBZ3 569 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 FCRL4Q96PJ5 515 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 CCT8L2Q96SF2 557 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 PITHD1Q9GZP4 211 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-230ENST00000641927 TUBB1Q9H4B7 451 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 PFDN4Q9NQP4 134 aa16.75■□□□□ 0.27
PHGDH-230ENST00000641927 HEATR5BQ9P2D3 2071 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 CTSVO60911 334 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 ZBTB11O95625 1053 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-230ENST00000641927 RPS15AP62244 130 aaKnown RBP16.74■□□□□ 0.27
PHGDH-230ENST00000641927 TRIP6Q15654 476 aaKnown RBP16.74■□□□□ 0.27
PHGDH-230ENST00000641927 IMPG1Q17R60 797 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 ZNF574Q6ZN55 896 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-230ENST00000641927 MAVSQ7Z434 540 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 SPATA21Q7Z572 469 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 PIP4P1Q86T03 277 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 HOMEZQ8IX15 550 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 CHCHD4Q8N4Q1 142 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 ANKRD53Q8N9V6 530 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 TCTN2Q96GX1 697 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 DPYSL5Q9BPU6 564 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 KLK4Q9Y5K2 254 aa16.74■□□□□ 0.27
PHGDH-230ENST00000641927 ATP6AP2A0A1C7CYW4 349 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 MAGEB17A8MXT2 336 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 AGRPO00253 132 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 SH3BGRLO75368 114 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 ATP6AP2O75787 350 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 FAM107AO95990 144 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 STATHP02808 62 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 SCTRP47872 440 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 LIMK1P53667 647 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 DEFB110Q30KQ9 67 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 PHF19Q5T6S3 580 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 FBXO42Q6P3S6 717 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 CARFQ8N187 725 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 USP7Q93009 1102 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 ZFYVE21Q9BQ24 234 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 SIKE1Q9BRV8 207 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 NT5DC2Q9H857 520 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 FAM60AQ9NP50 221 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 KLHL14Q9P2G3 628 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 PCDHGA4Q9Y5G9 962 aa16.73■□□□□ 0.27
PHGDH-230ENST00000641927 GOLGA8QA0A0J9YX86 632 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 IGHV5-10-1A0A0J9YXX1 117 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 GOLGA8OA6NCC3 632 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 D6RAR5 112 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 GOLGA8NF8WBI6 632 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 ZNF195O14628 629 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RFPL3O75679 317 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 HSD11B2P80365 405 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 HMGCS1Q01581 520 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 CLPPQ16740 277 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 C10orf62Q5T681 223 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 NXNQ6DKJ4 435 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 PRSS42Q7Z5A4 293 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 MFSD9Q8NBP5 474 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RCBTB1Q8NDN9 531 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 TTLQ8NG68 377 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 WDR48Q8TAF3 677 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RERGQ96A58 199 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 CCDC74BQ96LY2 380 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 CCT7Q99832 543 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 TMEM120AQ9BXJ8 343 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RHBGQ9H310 441 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 WDR55Q9H6Y2 383 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 ZFP69BQ9UJL9 534 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 SLC28A1O00337 649 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 NTN3O00634 580 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 NDUFS4O43181 175 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RGS14O43566 566 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 TGFB1P01137 390 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 EIF2S1P05198 315 aaKnown RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 ALOX15P16050 662 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 EPHA3P29320 983 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 SERPINB1P30740 379 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 AHRP35869 848 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 PIK3CBP42338 1070 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 ARFIP2P53365 341 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RPS13P62277 151 aaKnown RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 ILKQ13418 452 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 KCNAB1Q14722 419 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 SLC9B1Q4ZJI4 515 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 ZC3H12BQ5HYM0 836 aaKnown RBP16.72■□□□□ 0.27
PHGDH-230ENST00000641927 SPDYAQ5MJ70 313 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 FRMPD2BQ6IN97 320 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 EPGNQ6UW88 154 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RNF44Q7L0R7 432 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 NETO1Q8TDF5 533 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 BCAS4Q8TDM0 211 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 TUBGCP3Q96CW5 907 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 C3orf30Q96M34 536 aa16.72■□□□□ 0.27
PHGDH-230ENST00000641927 RILPQ96NA2 401 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms