RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 MRPS26Q9BYN8 205 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 DPY30Q9C005 99 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 PCBD2Q9H0N5 130 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 TCEAL2Q9H3H9 227 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 IL1RL2Q9HB29 575 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 SPATA6Q9NWH7 488 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 TRNAU1APQ9NX07 287 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 ZIM2Q9NZV7 527 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 SCHIP1Q9P0W5 487 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 AP4S1Q9Y587 144 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 ADAMTS9Q9P2N4 1935 aa8.52□□□□□ -1.04
PHGDH-219ENST00000641513 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 PIPSLA2A3N6 862 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 FAM234BA2RU67 622 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 ISM1B1AKI9 464 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 H0YIV9 168 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 HNRNPRO43390 633 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 RSL1D1O76021 490 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 SORBS2O94875 1100 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 EML2O95834 649 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 GPIP06744 558 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 UMPSP11172 480 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 JUNDP17535 347 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 NDUFS1P28331 727 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 CD38P28907 300 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 PKLRP30613 574 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 RPL5P46777 297 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 RPS9P46781 194 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 CCR8P51685 355 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 RPS13P62277 151 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 ACSM2AQ08AH3 577 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 EIF2B5Q13144 721 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 DYNC1I2Q13409 638 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 C1orf61Q13536 156 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 RCAN2Q14206 197 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 VPS26BQ4G0F5 336 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 C6orf10Q5SRN2 563 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 INTS11Q5TA45 600 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 ACSM2BQ68CK6 577 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 BLOC1S3Q6QNY0 202 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 ARMCX6Q7L4S7 300 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 DHFR2Q86XF0 187 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 PTRH1Q86Y79 214 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 FUNDC1Q8IVP5 155 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 TMEFF1Q8IYR6 380 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 LILRA2Q8N149 483 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 GPR156Q8NFN8 814 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 OR7G3Q8NG95 312 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 OR2L8Q8NGY9 312 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 CLHC1Q8NHS4 586 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 HUS1BQ8NHY5 278 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 FAM174AQ8TBP5 190 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 LCN9Q8WX39 176 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 UBE2E3Q969T4 207 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 APIPQ96GX9 242 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 APOLD1Q96LR9 279 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 HSPA12BQ96MM6 686 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 AIF1LQ9BQI0 150 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 EBPLQ9BY08 206 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 YIPF3Q9GZM5 350 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 CAAP1Q9H8G2 361 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 PELI2Q9HAT8 420 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 VCX3AQ9NNX9 186 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 SLC52A3Q9NQ40 469 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 ADA2Q9NZK5 511 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 VPS29Q9UBQ0 182 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 PNMA8BQ9ULN7 279 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 DOLKQ9UPQ8 538 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 ICKQ9UPZ9 632 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 AP3M1Q9Y2T2 418 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 CCL27Q9Y4X3 112 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 PCDHB11Q9Y5F2 797 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 AP4B1Q9Y6B7 739 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 DGKBQ9Y6T7 804 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 SCN2AQ99250 2005 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 SCN3AQ9NY46 2000 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 TNRC6BQ9UPQ9 1833 aaKnown RBP8.52□□□□□ -1.05
PHGDH-219ENST00000641513 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
PHGDH-219ENST00000641513 NUP214P35658 2090 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SPTY2D1-AS1A0A0U1RR47 76 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 A0A1W2PP18 115 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PRORSD1PA6NEY8 169 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ANKDD1BA6NHY2 528 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 MAGEB17A8MXT2 336 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 H7BY64 318 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 FXYD1O00168 92 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 EEDO75530 441 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 VIPP01282 170 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SERPIND1P05546 499 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 FAM58BPP0C7Q3 252 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SMIM18P0DKX4 95 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ERGP11308 486 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PRPS2P11908 318 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 BCKDHAP12694 445 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 F3P13726 295 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 HSD3B1P14060 373 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ZNF26P17031 533 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms