RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 C8orf44Q96CB5 159 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 DPH5Q9H2P9 285 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 ZBTB20Q9HC78 741 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-230ENST00000640482 ZNF160Q9HCG1 818 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 NOVA2Q9UNW9 492 aaKnown RBP23.92■■□□□ 1.42
VEGFA-230ENST00000640482 NSG1A0A0A6YYJ2 146 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 NSA2O95478 260 aaKnown RBP23.91■■□□□ 1.42
VEGFA-230ENST00000640482 GUCA1CO95843 209 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 BCL6P41182 706 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 CCR8P51685 355 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 Q6ZS92 163 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 NDUFAF7Q7L592 441 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 ASPGQ86U10 573 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 ABHD11Q8NFV4 315 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 OR9A4Q8NGU2 314 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 ANKRD7Q92527 254 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 TM4SF19Q96DZ7 209 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 VPS39Q96JC1 886 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 WDR77Q9BQA1 342 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-230ENST00000640482 EPS8L2Q9H6S3 715 aa23.91■■□□□ 1.42
VEGFA-230ENST00000640482 MRPS2Q9Y399 296 aaKnown RBP23.91■■□□□ 1.42
VEGFA-230ENST00000640482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.91■■□□□ 1.423e-7■□□□□ 8
VEGFA-230ENST00000640482 RELNP78509 3460 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 MDC1Q14676 2089 aaKnown RBP23.9■■□□□ 1.42
VEGFA-230ENST00000640482 EIF3HO15372 352 aaKnown RBP eCLIP23.9■■□□□ 1.426e-7■■□□□ 13.1
VEGFA-230ENST00000640482 RAD51CO43502 376 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 SLC35G6P0C7Q6 338 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 COX6A1P12074 109 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 GNLYP22749 145 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 UQCRFS1P47985 274 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 MAT1AQ00266 395 aaKnown RBP23.9■■□□□ 1.42
VEGFA-230ENST00000640482 SYT16Q17RD7 645 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 TMEM214Q6NUQ4 689 aaKnown RBP23.9■■□□□ 1.42
VEGFA-230ENST00000640482 SBSNQ6UWP8 590 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 IGFL2Q6UWQ7 119 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 TMEM207Q6UWW9 146 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 ZC3H7AQ8IWR0 971 aaKnown RBP23.9■■□□□ 1.42
VEGFA-230ENST00000640482 KBTBD2Q8IY47 623 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 TBC1D19Q8N5T2 526 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 MFSD9Q8NBP5 474 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 PPP4R1Q8TF05 950 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 SLC13A3Q8WWT9 602 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 MESP1Q9BRJ9 268 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 RHOJQ9H4E5 214 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 ANKHQ9HCJ1 492 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 MKL2Q9ULH7 1088 aa23.9■■□□□ 1.42
VEGFA-230ENST00000640482 A0A1W2PQ72 361 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 EEF1A2Q05639 463 aaKnown RBP23.89■■□□□ 1.41
VEGFA-230ENST00000640482 C2orf54Q08AI8 447 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 Q0VFX4 171 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 ZXDCQ2QGD7 858 aaPredicted RBP23.89■■□□□ 1.41
VEGFA-230ENST00000640482 FAAH2Q6GMR7 532 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 CAPN12Q6ZSI9 719 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 CDKL2Q92772 493 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 MACROD1Q9BQ69 325 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 SAYSD1Q9NPB0 183 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 RIC8BQ9NVN3 520 aa23.89■■□□□ 1.41
VEGFA-230ENST00000640482 LCMT2O60294 686 aaKnown RBP23.88■■□□□ 1.41
VEGFA-230ENST00000640482 BMP10O95393 424 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 IL1RNP18510 177 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 SLC12A2P55011 1212 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 TAS2R39P59534 338 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 ETF1P62495 437 aaKnown RBP23.88■■□□□ 1.41
VEGFA-230ENST00000640482 PPP1R3AQ16821 1122 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 ISLR2Q6UXK2 745 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 OR4K1Q8NGD4 311 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 ZCCHC10Q8TBK6 192 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 SNRNP40Q96DI7 357 aaKnown RBP23.88■■□□□ 1.41
VEGFA-230ENST00000640482 OR4K3Q96R72 315 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 SARGQ9BW04 601 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 POPDC3Q9HBV1 291 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 TXNDC16Q9P2K2 825 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 IKZF3Q9UKT9 509 aa23.88■■□□□ 1.41
VEGFA-230ENST00000640482 UTP11Q9Y3A2 253 aaKnown RBP23.88■■□□□ 1.41
VEGFA-230ENST00000640482 FLNBO75369 2602 aaKnown RBP23.87■■□□□ 1.41
VEGFA-230ENST00000640482 LOC102723996A0A087X1L8 192 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 IGHV1-45A0A0A0MS14 117 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 NPEPPSL1A6NEC2 478 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 OR1F1O43749 312 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 CYC1P08574 325 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 SNRPNP63162 240 aaKnown RBP23.87■■□□□ 1.41
VEGFA-230ENST00000640482 CSHL1Q14406 222 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 ZNF460Q14592 562 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 TMEM205Q6UW68 189 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 PRSS41Q7RTY9 318 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 CUZD1Q86UP6 607 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 CISD2Q8N5K1 135 aaKnown RBP23.87■■□□□ 1.41
VEGFA-230ENST00000640482 KCT2Q8NC54 265 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 OR51Q1Q8NH59 317 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 SLC5A11Q8WWX8 675 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 METTL21AQ8WXB1 218 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 LMF1Q96S06 567 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 GPAMQ9HCL2 828 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 DYRK1BQ9Y463 629 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 PCDHGA10Q9Y5H3 936 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 SLC22A7Q9Y694 548 aa23.87■■□□□ 1.41
VEGFA-230ENST00000640482 TRBC2A0A5B9 178 aa23.86■■□□□ 1.41
VEGFA-230ENST00000640482 CDC7O00311 574 aa23.86■■□□□ 1.41
VEGFA-230ENST00000640482 PRR35P0CG20 571 aa23.86■■□□□ 1.41
VEGFA-230ENST00000640482 C8orf89P0DMQ9 161 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms