RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GABRR3A8MPY1 467 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 J3KTA2 159 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 TNFRSF11BO00300 401 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 JRKO75564 520 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 ITGAMP11215 1152 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 GADD45AP24522 165 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 RPS3AP61247 264 aaKnown RBP14.1□□□□□ -0.15
SCARB2-221ENST00000640341 SP3Q02447 781 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 LRRC74AQ0VAA2 488 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 GAB1Q13480 694 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 STARD3Q14849 445 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 CDKN3Q16667 212 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 LYPLAL1Q5VWZ2 237 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 SCRN2Q96FV2 425 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 TCF25Q9BQ70 676 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 MAN2B2Q9Y2E5 1009 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 TSC22D4Q9Y3Q8 395 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 XIRP2A4UGR9 3374 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 DNAH14Q0VDD8 3507 aa14.1□□□□□ -0.15
SCARB2-221ENST00000640341 NINQ8N4C6 2090 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 NEDD8-MDP1E9PL57 170 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 ZNF821O75541 412 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 WBP4O75554 376 aaKnown RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 STSP08842 583 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 ALOX12P18054 663 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 PRIM2P49643 509 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 MC1RQ01726 317 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 MADCAM1Q13477 382 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 ACOX1Q15067 660 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 THOC6Q86W42 341 aaKnown RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 CACTIN-AS1Q8N1I8 211 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 STX19Q8N4C7 294 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 OR9Q2Q8NGE9 314 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 CEP295NLQ96MC4 621 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 DSN1Q9H410 356 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 TRIM39Q9HCM9 518 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 MRPL17Q9NRX2 175 aaKnown RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 ADPRHL2Q9NX46 363 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 IMPAD1Q9NX62 359 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 AP3M1Q9Y2T2 418 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 HLA-FP30511 346 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 SERPINB1P30740 379 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 CRISP3P54108 245 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 PFN3P60673 137 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 IL18R1Q13478 541 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 TIGD6Q17RP2 521 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 COX20Q5RI15 118 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 CAPN13Q6MZZ7 669 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 SERPINA11Q86U17 422 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 HEATR4Q86WZ0 1026 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 SLC5A8Q8N695 610 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 OR6Q1Q8NGQ2 317 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 S100ZQ8WXG8 99 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 MRPS31Q92665 395 aaKnown RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 TESCQ96BS2 214 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 ZNF300Q96RE9 604 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 MROQ9BYG7 248 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 SH3BP5O60239 455 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 SLC16A8O95907 504 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 WNT3P56703 355 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 HIST2H2ACQ16777 129 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 TSPYL5Q86VY4 417 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 VPS37AQ8NEZ2 397 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 DYNC2LI1Q8TCX1 351 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 UBTD2Q8WUN7 234 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 TMPRSS11EQ9UL52 423 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 NDRG4Q9ULP0 352 aaKnown RBP14.09□□□□□ -0.15
SCARB2-221ENST00000640341 SLC6A14Q9UN76 642 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 RNF6Q9Y252 685 aa14.09□□□□□ -0.15
SCARB2-221ENST00000640341 AOC2O75106 756 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 TGFB1P01137 390 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 C8GP07360 202 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 SRSF11Q05519 484 aaKnown RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 EIF3MQ7L2H7 374 aaKnown RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 TMEM159Q96B96 161 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 ACAT2Q9BWD1 397 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 EXOSC4Q9NPD3 245 aaKnown RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 KCNE1BA0A087WTH5 132 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 NRG2O14511 850 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 TSPAN6O43657 245 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 C9P02748 559 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 C1SP09871 688 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 JUPP14923 745 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 XPAP23025 273 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 MAGEA2P43356 314 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 RPS13P62277 151 aaKnown RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 MED22Q15528 200 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 ST13P5Q8NFI4 369 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 CYB5D2Q8WUJ1 264 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 YIPF6Q96EC8 236 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 Q96MT0 163 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 OR51E2Q9H255 320 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 NECTIN3Q9NQS3 549 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 INSL5Q9Y5Q6 135 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 ARHGEF33A8MVX0 844 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 SOCS5O75159 536 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 CNOT3O75175 753 aaKnown RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 RECQLP46063 649 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 SPINT3P49223 89 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms