RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SRSF11Q05519 484 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 DDX39BQ13838 428 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 DAG1Q14118 895 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 IRF4Q15306 451 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ABRAXAS1Q6UWZ7 409 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ZDHHC13Q8IUH4 622 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 SLC44A3Q8N4M1 653 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 OR14C36Q8NHC7 312 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 NELL1Q92832 810 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 POP5Q969H6 163 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 NCLNQ969V3 563 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 C11orf24Q96F05 449 aaPredicted RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 REXO5Q96IC2 774 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 REXO4Q9GZR2 422 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 MAGIXQ9H6Y5 334 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 BRF2Q9HAW0 419 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 TM7SF3Q9NS93 570 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 NUP214P35658 2090 aaPredicted RBP14.55□□□□□ -0.08
TRIM3-215ENST00000639856 A0A087WXM4 84 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 VEGFDO43915 354 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 SEC24DO94855 1032 aaPredicted RBP14.55□□□□□ -0.08
TRIM3-215ENST00000639856 CST1P01037 141 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 ALBP02768 609 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 IL1RNP18510 177 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 TRPC1P48995 793 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 UGT8Q16880 541 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 SDE2Q6IQ49 451 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 B3GNT6Q6ZMB0 384 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 STK32CQ86UX6 486 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 OFCC1Q8IZS5 231 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 OR7A2PQ8NGA2 310 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 NETO1Q8TDF5 533 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 SGK2Q9HBY8 427 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 CD93Q9NPY3 652 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 THEGQ9P2T0 379 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 CEPT1Q9Y6K0 416 aa14.55□□□□□ -0.08
TRIM3-215ENST00000639856 PCM1Q15154 2024 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 G3V2T6 193 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 H3BSA7 217 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 NARSO43776 548 aaKnown RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 C1orf105O95561 183 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 MYCLP1P12525 358 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 HOXB6P17509 224 aaKnown RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 CDH2P19022 906 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 POU3F3P20264 500 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 C21orf58P58505 322 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 ACSM2AQ08AH3 577 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 E2F2Q14209 437 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 DUOXA1Q1HG43 343 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 ACSM2BQ68CK6 577 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 TRMT11Q7Z4G4 463 aaKnown RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 CLEC4FQ8N1N0 589 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 LMNTD1Q8N9Z9 388 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 FBXO15Q8NCQ5 510 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 OR8J2Q8NGG1 315 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 LINC00615Q96LM1 132 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 PANX1Q96RD7 426 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 SOX17Q9H6I2 414 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 SLC23A2Q9UGH3 650 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 UTS2RQ9UKP6 389 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 KCNE2Q9Y6J6 123 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 MAGEB17A8MXT2 336 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 EVPLLA8MZ36 301 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 FPGTO14772 594 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 SCN2BO60939 215 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 HPRP00739 348 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 SERPINA1P01009 418 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 DNTTP04053 509 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 MAT2AP31153 395 aaKnown RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 WNT3P56703 355 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 SLC14A1Q13336 389 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 SERPINA11Q86U17 422 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 TP53I13Q8NBR0 393 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 OR7G3Q8NG95 312 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 OR2L2Q8NH16 312 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 ADAMTS16Q8TE57 1224 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 SDCCAG3Q96C92 435 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 ZNF514Q96K75 400 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 FAM120CQ9NX05 1096 aaKnown RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 GPR34Q9UPC5 381 aa14.54□□□□□ -0.08
TRIM3-215ENST00000639856 MAGED1Q9Y5V3 778 aaPredicted RBP14.54□□□□□ -0.08
TRIM3-215ENST00000639856 A0A1W2PQU0 124 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 PLRG1O43660 514 aaKnown RBP14.53□□□□□ -0.08
TRIM3-215ENST00000639856 MYO1DO94832 1006 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 THRBP10828 461 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 COX7A2P14406 83 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 CD72P21854 359 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ADPRHP54922 357 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 GRSF1Q12849 480 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRIM3-215ENST00000639856 CCDC85BQ15834 202 aaPredicted RBP14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ZNF551Q7Z340 670 aaPredicted RBP14.53□□□□□ -0.08
TRIM3-215ENST00000639856 FAM124AQ86V42 546 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ALDH16A1Q8IZ83 802 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 SVOPLQ8N434 492 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 ZNF480Q8WV37 535 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 STARD8Q92502 1023 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 NEIL2Q969S2 332 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 TMIGD2Q96BF3 282 aa14.53□□□□□ -0.08
TRIM3-215ENST00000639856 RDH12Q96NR8 316 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms