RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PTBP2Q9UKA9 531 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 NDRG2Q9UN36 371 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 USP3Q9Y6I4 520 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 PSMA3P25788 255 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 HTR1EP28566 365 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 IL18Q14116 193 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 TMEM126BQ8IUX1 230 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 OR13J1Q8NGT2 312 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 GPR151Q8TDV0 419 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 PREBQ9HCU5 417 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 IL26Q9NPH9 171 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 SLC25A12O75746 678 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 IFNGP01579 166 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 NCEH1Q6PIU2 408 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 FAM220AQ7Z4H9 259 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 RNF130Q86XS8 419 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 PEX5LQ8IYB4 626 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 SLC5A11Q8WWX8 675 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 GLYATL1Q969I3 302 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 RGMAQ96B86 450 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 C11orf24Q96F05 449 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 IL17FQ96PD4 163 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 WDR83Q9BRX9 315 aaKnown RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 IKZF2Q9UKS7 526 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 MPZL2O60487 215 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 RHOP08100 348 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 ARSAP15289 507 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 KDELR2P33947 212 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 LGALS3BPQ08380 585 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 TOMM20Q15388 145 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 RAB41Q5JT25 222 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 ALKAL1Q6UXT8 129 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 AKAP14Q86UN6 197 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 OR9A1PQ8NGU1 263 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF563Q8TA94 476 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 GEMIN6Q8WXD5 167 aaKnown RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 CLEC4MQ9H2X3 399 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 SPHK2Q9NRA0 654 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 RIMKLBQ9ULI2 386 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 OARD1Q9Y530 152 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 SPIN1Q9Y657 262 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 A0A1B0GW55 424 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 CH25HO95992 272 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DUX4L2P0CJ85 424 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DUX4L3P0CJ86 424 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DUX4L4P0CJ87 422 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DUX4L5P0CJ88 424 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DUX4L6P0CJ89 424 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DUX4L7P0CJ90 424 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 XKP51811 444 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DOC2AQ14183 400 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 LASP1Q14847 261 aaKnown RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 ATP6AP1Q15904 470 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 KIAA1161Q6NSJ0 714 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 CELF5Q8N6W0 485 aaKnown RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 CNIH3Q8TBE1 160 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 TAMM41Q96BW9 452 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 L3HYPDHQ96EM0 354 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 MGME1Q9BQP7 344 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 KCNH6Q9H252 994 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 SDR39U1Q9NRG7 319 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-216ENST00000639300 TREX1Q9NSU2 369 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 MCUBQ9NWR8 336 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 ELOVL2Q9NXB9 296 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 DUX4Q9UBX2 424 aa13.97□□□□□ -0.17
SCARB2-216ENST00000639300 GNRH1P01148 92 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 H1F0P07305 194 aaKnown RBP13.96□□□□□ -0.17
SCARB2-216ENST00000639300 SLC6A4P31645 630 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 MPIP34949 423 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 GPR68Q15743 365 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF773Q6PK81 442 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 TAS1R1Q7RTX1 841 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 COX18Q8N8Q8 333 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 AQP11Q8NBQ7 271 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF296Q8WUU4 475 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-216ENST00000639300 TBX5Q99593 518 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
SCARB2-216ENST00000639300 FARSBQ9NSD9 589 aaKnown RBP13.96□□□□□ -0.17
SCARB2-216ENST00000639300 FBXL12Q9NXK8 326 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 ADAM12O43184 909 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 ABCB7O75027 752 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 RPS3AP61247 264 aaKnown RBP13.96□□□□□ -0.17
SCARB2-216ENST00000639300 VMACQ2NL98 169 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 C5orf22Q49AR2 442 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 ZFAND4Q86XD8 727 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 GPR135Q8IZ08 494 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 CHST14Q8NCH0 376 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 XKR8Q9H6D3 395 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 COMMD3Q9UBI1 195 aa13.96□□□□□ -0.17
SCARB2-216ENST00000639300 NDUFS4O43181 175 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 PTNP21246 168 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF763Q0D2J5 394 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 PLEKHS1Q5SXH7 462 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 C6orf141Q5SZD1 244 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF783Q6ZMS7 281 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 GHDCQ8N2G8 530 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 OR10H4Q8NGA5 316 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 OR8J3Q8NGG0 315 aa13.96□□□□□ -0.18
SCARB2-216ENST00000639300 ARRDC2Q8TBH0 407 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms