RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	ARL10	Q8N8L6	244 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	KY	Q8NBH2	561 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	SAP25	Q8TEE9	199 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	CHTF18	Q8WVB6	975 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	FCRL1	Q96LA6	429 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	SLC38A3	Q99624	504 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	C1orf50	Q9BV19	199 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	DUSP23	Q9BVJ7	150 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	TBC1D10A	Q9BXI6	508 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	GAREM1	Q9H706	876 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	SIRT5	Q9NXA8	310 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	ZIM2	Q9NZV7	527 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	RUVBL1	Q9Y265	456 aa	Known RBP	11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	CROCC	Q5TZA2	2017 aa		11.29	□□□□□ -0.6
CLN6-223	ENST00000637823	UNC13C	Q8NB66	2214 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823		A0A0J9YY10	115 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	LOC100653049	A0A140TA62	436 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	FEZF1	A0PJY2	475 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	FAM86C2P	A6NEL3	165 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	HAT1	O14929	419 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	NUDT21	O43809	227 aa	Known RBP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	CLEC3A	O75596	197 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	SLC22A3	O75751	556 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	KRT34	O76011	436 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	EPN2	O95208	641 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	CER1	O95813	267 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	TGFB1	P01137	390 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	PROS1	P07225	676 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	SNRPB2	P08579	225 aa	Known RBP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	G6PD	P11413	515 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	BCKDHA	P12694	445 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	PTPN4	P29074	926 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	GPR3	P46089	330 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	NCALD	P61601	193 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	RPS15A	P62244	130 aa	Known RBP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	ACSM2A	Q08AH3	577 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	STX5	Q13190	355 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	SPIN4	Q56A73	249 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	TRIM61	Q5EBN2	209 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	DEPDC1	Q5TB30	811 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	ACSM2B	Q68CK6	577 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	ADNP2	Q6IQ32	1131 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	NOXRED1	Q6NXP6	359 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	PAOX	Q6QHF9	649 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	FIGLA	Q6QHK4	219 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	CYP20A1	Q6UW02	462 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	VN1R5	Q7Z5H4	357 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	ZNF761	Q86XN6	746 aa	Predicted RBP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	FAM20C	Q8IXL6	584 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	POU5F2	Q8N7G0	328 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	ANKRD53	Q8N9V6	530 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	MFSD9	Q8NBP5	474 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	TRPV3	Q8NET8	790 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	TSPEAR	Q8WU66	669 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	THAP11	Q96EK4	314 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	APIP	Q96GX9	242 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	RTKN	Q9BST9	563 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	AHSP	Q9NZD4	102 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	CCDC167	Q9P0B6	97 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	LRIT1	Q9P2V4	623 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	RAB23	Q9ULC3	237 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	POLR3H	Q9Y535	204 aa	Predicted RBP	11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	PCDHGA5	Q9Y5G8	931 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	AP1M2	Q9Y6Q5	423 aa		11.28	□□□□□ -0.6
CLN6-223	ENST00000637823	FAM234B	A2RU67	622 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	OR2A25	A4D2G3	310 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	PRR33	A8MZF0	331 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823		B2RBV5	119 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	PATE3	B3GLJ2	98 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	ETHE1	O95571	254 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	GLB1	P16278	677 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	TYRP1	P17643	537 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	CCT8	P50990	548 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	NME5	P56597	212 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	UFM1	P61960	85 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	TBL3	Q12788	808 aa	Known RBP	11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	ZIC1	Q15915	447 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	FBXO42	Q6P3S6	717 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	GALNT18	Q6P9A2	607 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	ZC3H14	Q6PJT7	736 aa	Known RBP	11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	BLOC1S3	Q6QNY0	202 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	ZNF438	Q7Z4V0	828 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	SNX32	Q86XE0	403 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	PLD3	Q8IV08	490 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	FUNDC1	Q8IVP5	155 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	SLC35F3	Q8IY50	421 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	METTL4	Q8N3J2	472 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	LIX1	Q8N485	282 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	OR6C4	Q8NGE1	309 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	OR4C6	Q8NH72	309 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	CREB3L4	Q8TEY5	395 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	C11orf24	Q96F05	449 aa	Predicted RBP	11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	APOLD1	Q96LR9	279 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	BTBD10	Q9BSF8	475 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	SLC25A23	Q9BV35	468 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	MS4A8	Q9BY19	250 aa		11.27	□□□□□ -0.61
CLN6-223	ENST00000637823	RAB33B	Q9H082	229 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 282.1 ms