RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 LYSMD4Q5XG99 296 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 REP15Q6BDI9 236 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 FAM109BQ6ICB4 259 aaPredicted RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 CASP12Q6UXS9 341 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 C2orf73Q8N5S3 287 aaPredicted RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 FITM2Q8N6M3 262 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 TOE1Q96GM8 510 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 CDC6Q99741 560 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 OLFM1Q99784 485 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 MCMBPQ9BTE3 642 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 LRRC3Q9BY71 257 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 C12orf65Q9H3J6 166 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 PDE7BQ9NP56 450 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 ARL8BQ9NVJ2 186 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 OR6C2Q9NZP2 312 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 PDP2Q9P2J9 529 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 SUCOQ9UBS9 1254 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 PARP14Q460N5 1801 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 RNF223E7ERA6 249 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 NDUFS4O43181 175 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 ERI3O43414 337 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 SLC28A2O43868 658 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 PDE5AO76074 875 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 ALAS2P22557 587 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 ALDH4A1P30038 563 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 ARCN1P48444 511 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 KCNC1P48547 511 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 INPP1P49441 399 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 PLA2G16P53816 162 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 SRP54P61011 504 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 DPTQ07507 201 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 TOP3AQ13472 1001 aaPredicted RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 NR1D2Q14995 579 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 LRRC36Q1X8D7 754 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 EIPR1Q53HC9 387 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 COQ5Q5HYK3 327 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 PARM1Q6UWI2 310 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 LCTLQ6UWM7 567 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 THSD4Q6ZMP0 1018 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 CEP97Q8IW35 865 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 FAM217AQ8IXS0 508 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 RNF168Q8IYW5 571 aaPredicted RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 PLD6Q8N2A8 252 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 SDR16C5Q8N3Y7 309 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 PGBD5Q8N414 524 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 NR4A3Q92570 626 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 PMM1Q92871 262 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 NAT6Q93015 286 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 FUBP1Q96AE4 644 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 KCNC2Q96PR1 638 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 KCNK12Q9HB15 430 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 TRNAU1APQ9NX07 287 aaKnown RBP5.34□□□□□ -1.55
CHD2-227ENST00000637572 ZDHHC2Q9UIJ5 367 aa5.34□□□□□ -1.55
CHD2-227ENST00000637572 KNL1Q8NG31 2342 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 A0A1W2PP18 115 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 CPED1A4D0V7 1026 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 KRT87PA6NCN2 255 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 CAPN14A8MX76 684 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 LILRA1O75019 489 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 CD38P28907 300 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 ELF3P78545 371 aaPredicted RBP5.34□□□□□ -1.56
CHD2-227ENST00000637572 FAM174BQ3ZCQ3 159 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 BCL7AQ4VC05 210 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 DENND5AQ6IQ26 1287 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 CYP2R1Q6VVX0 501 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 IKBIPQ70UQ0 350 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 TRIM74Q86UV6 250 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 ZFAND4Q86XD8 727 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 FAM129CQ86XR2 697 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 DHRSXQ8N5I4 330 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 RBM15BQ8NDT2 890 aaKnown RBP5.34□□□□□ -1.56
CHD2-227ENST00000637572 OR56A1Q8NGH5 318 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 CEP76Q8TAP6 659 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 PHF10Q8WUB8 498 aaKnown RBP5.34□□□□□ -1.56
CHD2-227ENST00000637572 ZFPM2Q8WW38 1151 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 PIGKQ92643 395 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 ESAMQ96AP7 390 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 EXOSC8Q96B26 276 aaKnown RBP5.34□□□□□ -1.56
CHD2-227ENST00000637572 MTERF3Q96E29 417 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 MYADMQ96S97 322 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 DPYSL5Q9BPU6 564 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 BRINP2Q9C0B6 783 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 PRDM8Q9NQV8 689 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 POT1Q9NUX5 634 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 NFKBIL1Q9UBC1 381 aaPredicted RBP5.34□□□□□ -1.56
CHD2-227ENST00000637572 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 COPG1Q9Y678 874 aaKnown RBP5.34□□□□□ -1.56
CHD2-227ENST00000637572 SCN10AQ9Y5Y9 1956 aa5.34□□□□□ -1.56
CHD2-227ENST00000637572 PRSS51A0A1B0GVH4 220 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 AQP12BA6NM10 295 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 GTPBP1O00178 669 aaKnown RBP5.33□□□□□ -1.56
CHD2-227ENST00000637572 CYP7B1O75881 506 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 CER1O95813 267 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 CD63P08962 238 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 DHRS4L1P0CG22 281 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 DRD2P14416 443 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 ENDOUP21128 410 aaKnown RBP5.33□□□□□ -1.56
CHD2-227ENST00000637572 IGFBP6P24592 240 aaPredicted RBP5.33□□□□□ -1.56
CHD2-227ENST00000637572 AOAHP28039 575 aa5.33□□□□□ -1.56
CHD2-227ENST00000637572 CCR5P51681 352 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms