RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PRORSD1PA6NEY8 169 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 PRAMEF4O60810 478 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 CLDN9O95484 217 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 PCCBP05166 539 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 SLC7A2P52569 658 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 RHDQ02161 417 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 SELENBP1Q13228 472 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 PIP5KL1Q5T9C9 394 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 PRAMEF9Q5VWM5 478 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 BLOC1S3Q6QNY0 202 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 SVIPQ8NHG7 77 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
CLN6-217ENST00000636964 ASB9Q96DX5 294 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 NTMT1Q9BV86 223 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 POLR1BQ9H9Y6 1135 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 INTS7Q9NVH2 962 aaKnown RBP11.13□□□□□ -0.63
CLN6-217ENST00000636964 SLAMF8Q9P0V8 285 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 MUC22E2RYF6 1773 aaPredicted RBP11.13□□□□□ -0.63
CLN6-217ENST00000636964 TRPM6Q9BX84 2022 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 A0A1W2PP55 124 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 TCRBV3S1A0A5B6 114 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 MANBAO00462 879 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 EBLN1P0CF75 366 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 ZNF8P17098 575 aaPredicted RBP11.13□□□□□ -0.63
CLN6-217ENST00000636964 NR4A1P22736 598 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 GGT5P36269 586 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 CBX5P45973 191 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 GSSP48637 474 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 KCNK10P57789 538 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 CST6Q15828 149 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 IMPG1Q17R60 797 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 TIGD2Q4W5G0 525 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 KIAA1211LQ6NV74 962 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 CYP2U1Q7Z449 544 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 RGL4Q8IZJ4 473 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 HDDC3Q8N4P3 179 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 PROKR1Q8TCW9 393 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 HPS1Q92902 700 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 EHD1Q9H4M9 534 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 UCKL1Q9NWZ5 548 aa11.13□□□□□ -0.63
CLN6-217ENST00000636964 SLC5A10A0PJK1 596 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 STMND1H3BQB6 276 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 GUCY1B2O75343 617 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SEC22BO75396 215 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 RSL1D1O76021 490 aaKnown RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 MATN4O95460 622 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 MYF6P23409 242 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 OPRL1P41146 370 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 ZFP36L2P47974 494 aaKnown RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 TAS2R38P59533 333 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 FAPQ12884 760 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 NAE1Q13564 534 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 PTGR1Q14914 329 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 PAGE3Q5JUK9 113 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 TTC23LQ6PF05 361 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 TRMT11Q7Z4G4 463 aaKnown RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 ZNF547Q8IVP9 402 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 OFCC1Q8IZS5 231 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 DNAJB14Q8TBM8 379 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 GANCQ8TET4 914 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 DACT3Q96B18 629 aaPredicted RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 CTRCQ99895 268 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 LGR4Q9BXB1 951 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 MROQ9BYG7 248 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SOX17Q9H6I2 414 aaPredicted RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 PRM3Q9NNZ6 103 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SPAG4Q9NPE6 437 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 CCL27Q9Y4X3 112 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 ASPDHA6ND91 283 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SAC3D1A6NKF1 404 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 H3BM21 787 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 K7EQS6 105 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 ARNTLO00327 626 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 TRIM38O00635 465 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 PDYNP01213 254 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 POLR2JP52435 117 aaKnown RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 DGKQP52824 942 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 PFN3P60673 137 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 ESRRGP62508 458 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 TRIM25Q14258 630 aaKnown RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 NFE2L1Q14494 772 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 TMEM52BQ4KMG9 183 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 TTC33Q6PID6 262 aaPredicted RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 CYP20A1Q6UW02 462 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 KCTD8Q6ZWB6 473 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 NLRP8Q86W28 1048 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 CLHC1Q8NHS4 586 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 PSD2Q9BQI7 771 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SLC52A3Q9NQ40 469 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 CCDC154A6NI56 674 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 QSOX1O00391 747 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 B4GAT1O43505 415 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SH3BGRLO75368 114 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 POP7O75817 140 aaKnown RBP11.12□□□□□ -0.63
CLN6-217ENST00000636964 SLC16A8O95907 504 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 GSTM1P09488 218 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 LTBRP36941 435 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SLC6A12P48065 614 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 INAVAQ3KP66 663 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 FAM46CQ5VWP2 391 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms