RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CDKN2AIPNLQ96HQ2 116 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 RAB3IPQ96QF0 476 aaPredicted RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 CAB39LQ9H9S4 337 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 NMRAL1Q9HBL8 299 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 FAM60AQ9NP50 221 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 OR6C2Q9NZP2 312 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 MAP10Q9P2G4 905 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 SLC2A6Q9UGQ3 507 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 FBXO5Q9UKT4 447 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 SRPK3Q9UPE1 567 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 ICKQ9UPZ9 632 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 TEX15Q9BXT5 2789 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 A0A087X1B8 175 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 FAM95CA0A1B0GW59 222 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 TMEM114B3SHH9 223 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 PEX12O00623 359 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 FTH1P02794 183 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 ALPPP05187 535 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 CHRM5P08912 532 aaPredicted RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 PRSS56P0CW18 603 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 CBSLP0DN79 551 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 UGT2B7P16662 529 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 STMN1P16949 149 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 PSMA3P25788 255 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 ACADLP28330 430 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 GABRB3P28472 473 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 CBSP35520 551 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 NSG1P42857 185 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 SLC1A2P43004 574 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 GABRA4P48169 554 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 RAB10P61026 200 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 ELF3P78545 371 aaPredicted RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 DCDP81605 110 aaKnown RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 PLOD1Q02809 727 aaPredicted RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 MYBPC3Q14896 1274 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 TSNAXIP1Q2TAA8 658 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 HIST2H2BCQ6DN03 193 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 ZNF470Q6ECI4 717 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 TLDC1Q6P9B6 456 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 TBC1D1Q86TI0 1168 aaPredicted RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 TRIM73Q86UV7 250 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 PIANPQ8IYJ0 282 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 PLD6Q8N2A8 252 aaKnown RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 OR5AR1Q8NGP9 310 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 OR6Y1Q8NGX8 325 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 PIWIL2Q8TC59 973 aaKnown RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 OR2A14Q96R47 310 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 LRMDAQ9H2I8 198 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 LUZP4Q9P127 313 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 NDOR1Q9UHB4 597 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 ASF1AQ9Y294 204 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 ACOT9Q9Y305 439 aa12.11□□□□□ -0.47
CTSD-208ENST00000636843 PTRH2Q9Y3E5 179 aaKnown RBP12.11□□□□□ -0.47
CTSD-208ENST00000636843 PRRC2CQ9Y520 2896 aaKnown RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 A0A0J9YY10 115 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 MGRN1O60291 552 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 KDM1AO60341 852 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 CCDC22O60826 627 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 IPO13O94829 963 aaKnown RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 SERPINB3P29508 390 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 FOLR3P41439 243 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 SLC12A2P55011 1212 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 SOX8P57073 446 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 ABCE1P61221 599 aaKnown RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 MPP1Q00013 466 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 ACVR1Q04771 509 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 CTBP1Q13363 440 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 MRPL49Q13405 166 aaKnown RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 RAPSNQ13702 412 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 KRT72Q14CN4 511 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 ZIC1Q15915 447 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 PLEKHN1Q494U1 663 aaPredicted RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 DCAF10Q5QP82 559 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 LYPLAL1Q5VWZ2 237 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 IGFL3Q6UXB1 125 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 DENND6AQ8IWF6 608 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 GALNT16Q8N428 558 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 OR5K2Q8NHB8 316 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 ELMO1Q92556 727 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 TSPAN17Q96FV3 270 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 GBP5Q96PP8 586 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 SPRTNQ9H040 489 aaPredicted RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 IFT80Q9P2H3 777 aaPredicted RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 B3GNT3Q9Y2A9 372 aa12.1□□□□□ -0.47
CTSD-208ENST00000636843 UTP20O75691 2785 aaKnown RBP12.1□□□□□ -0.47
CTSD-208ENST00000636843 SLC5A10A0PJK1 596 aa12.09□□□□□ -0.47
CTSD-208ENST00000636843 F8W8V4 182 aa12.09□□□□□ -0.47
CTSD-208ENST00000636843 G3V2L1 256 aa12.09□□□□□ -0.47
CTSD-208ENST00000636843 ZSCAN9O15535 394 aaPredicted RBP12.09□□□□□ -0.47
CTSD-208ENST00000636843 TRIM13O60858 407 aa12.09□□□□□ -0.47
CTSD-208ENST00000636843 SLC35E2BP0CK96 405 aa12.09□□□□□ -0.47
CTSD-208ENST00000636843 T-ENOLP0DO92 83 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms