RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 METTL8Q9H825 291 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 SP140LQ9H930 580 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 GPR35Q9HC97 309 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 MRPS30Q9NP92 439 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CCNB1IP1Q9NPC3 277 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 PDGFCQ9NRA1 345 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 SLC6A13Q9NSD5 602 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 TREX1Q9NSU2 369 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 AP5S1Q9NUS5 200 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 MRPL22Q9NWU5 206 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 MRPL39Q9NYK5 338 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 VSX1Q9NZR4 365 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CLEC2DQ9UHP7 191 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 MAGEL2Q9UJ55 1249 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 NAGKQ9UJ70 344 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 TCFL5Q9UL49 500 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 A4GNTQ9UNA3 340 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 PCDHAC2Q9Y5I4 1007 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 COL14A1Q05707 1796 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 A0A087WUV0 522 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 GOLGA6L10A6NI86 522 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 WASHC1A8K0Z3 465 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 A8MUI8 341 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 H0YJX3 145 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 H3BMM5 538 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 M0QZQ0 153 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 TNFRSF10AO00220 468 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 PJA2O43164 708 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 NDUFS4O43181 175 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 FCGR3BO75015 233 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 BMP10O95393 424 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 C8AP07357 584 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CHRM4P08173 479 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ALPIP09923 528 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 FCGR2AP12318 317 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CPA3P15088 417 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 FOSL2P15408 326 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CD72P21854 359 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 SDHBP21912 280 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 PCMT1P22061 227 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 AZGP1P25311 298 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 PIK3R1P27986 724 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 HLA-FP30511 346 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 NTSR1P30989 418 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 YWHABP31946 246 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CHI3L1P36222 383 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 SLC1A4P43007 532 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ROR2Q01974 943 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 FOLH1Q04609 750 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 FOXM1Q08050 763 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 GOLGA8FQ08AF8 430 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CAPRIN1Q14444 709 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 FGFBP1Q14512 234 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 SLC18A3Q16572 532 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 SMN1Q16637 294 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 TPD52L1Q16890 204 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 EMC4Q5J8M3 183 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 AARS2Q5JTZ9 985 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 HP1BP3Q5SSJ5 553 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 GPR157Q5UAW9 335 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 TTC23Q5W5X9 447 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 SEL1L3Q68CR1 1132 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 RFWD3Q6PCD5 774 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 WASH2PQ6VEQ5 465 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF677Q86XU0 584 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 PALB2Q86YC2 1186 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 TBC1D10CQ8IV04 446 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 THEM5Q8N1Q8 247 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF655Q8N720 491 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 OR5M1Q8NGP8 315 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 GRHL3Q8TE85 626 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 CLEC4CQ8WTT0 213 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 OSCP1Q8WVF1 389 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 RFT1Q96AA3 541 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 STRADBQ9C0K7 418 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 DRC3Q9H069 523 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ZMYND12Q9H0C1 365 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ATXN3LQ9H3M9 355 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 KCNK9Q9NPC2 374 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ZCCHC3Q9NUD5 404 aaKnown RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.68□□□□□ -1.661e-6■■■□□ 17.3
SDCBP-213ENST00000630925 DTLQ9NZJ0 730 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 ADAM22Q9P0K1 906 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 USP22Q9UPT9 525 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 POFUT2Q9Y2G5 429 aa4.68□□□□□ -1.66
SDCBP-213ENST00000630925 COA3Q9Y2R0 106 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.68□□□□□ -1.66
SDCBP-213ENST00000630925 PHRF1Q9P1Y6 1649 aaKnown RBP4.67□□□□□ -1.66
SDCBP-213ENST00000630925 CNTNAP4Q9C0A0 1308 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 A0A1W2PRB8 838 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 ERVV-1B6SEH8 477 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 LINC01387J3KSC0 135 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 M0QYG6 137 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 CAPN5O15484 640 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-213ENST00000630925 ATP9AO75110 1047 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 MOSPD3O75425 235 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 ZWINTO95229 277 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 ANXA4P09525 319 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-213ENST00000630925 CCNB1P14635 433 aa4.67□□□□□ -1.66
SDCBP-213ENST00000630925 GNSP15586 552 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms