RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 DCAF12Q5T6F0 453 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 FRG2Q64ET8 278 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 TTC19Q6DKK2 380 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-219ENST00000629151 CEACAM20Q6UY09 585 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 DGLUCYQ7Z3D6 616 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 PPP1R3BQ86XI6 285 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 MYLK4Q86YV6 388 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-219ENST00000629151 FAM20CQ8IXL6 584 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 CLYBLQ8N0X4 340 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 BMPERQ8N8U9 685 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 RCBTB1Q8NDN9 531 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 SRFBP1Q8NEF9 429 aaKnown RBP11.05□□□□□ -0.64
PTPN7-219ENST00000629151 OR4F6Q8NGB9 312 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 OR52B6Q8NGF0 335 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 MDM1Q8TC05 714 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 METTL6Q8TCB7 284 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 LRRC8CQ8TDW0 803 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 FAR2Q96K12 515 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 PPM1MQ96MI6 270 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 NSUN5Q96P11 429 aaKnown RBP11.05□□□□□ -0.64
PTPN7-219ENST00000629151 FRG2BQ96QU4 278 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 OR6C1Q96RD1 312 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 CENPKQ9BS16 269 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 DDA1Q9BW61 102 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 ELOVL6Q9H5J4 265 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 FAM60AQ9NP50 221 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 MID1IP1Q9NPA3 183 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 SIDT1Q9NXL6 827 aaKnown RBP11.05□□□□□ -0.64
PTPN7-219ENST00000629151 SLC39A1Q9NY26 324 aa11.05□□□□□ -0.64
PTPN7-219ENST00000629151 A0A0J9YVX5 310 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 SERTM1A2A2V5 107 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 FITM1A5D6W6 292 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 SLCO1B7G3V0H7 640 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 H0YGG7 62 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 HAT1O14929 419 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 OR2B3O76000 313 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 SERPINA6P08185 405 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 UROSP10746 265 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 HSD3B1P14060 373 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 FOLR1P15328 257 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 PTX3P26022 381 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 HSD3B2P26439 372 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 VARSP26640 1264 aaKnown RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 RBMS1P29558 406 aaKnown RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 HMOX2P30519 316 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 GABRA4P48169 554 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 SLC1A6P48664 564 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 ERVPABLB-1P60509 514 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 ARF3P61204 181 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 STXBP1P61764 594 aaKnown RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 YBX1P67809 324 aaKnown RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 FOXM1Q08050 763 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 ZRSR2Q15696 482 aaKnown RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 CPSF6Q16630 551 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 TMEM35AQ53FP2 167 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 IGF2-ASQ6U949 168 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 RGS9BPQ6ZS82 235 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 RNF165Q6ZSG1 346 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 CHSY3Q70JA7 882 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 ASPGQ86U10 573 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 CUZD1Q86UP6 607 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 GBP7Q8N8V2 638 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 TTC29Q8NA56 475 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 OR7G3Q8NG95 312 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 NT5CQ8TCD5 201 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 AGAP11Q8TF27 550 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 CKAP2Q8WWK9 683 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 SLC13A3Q8WWT9 602 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 ZNF75CPQ92670 426 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 TM4SF19Q96DZ7 209 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 MAGEB18Q96M61 343 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 KLHL25Q9H0H3 589 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 POLR1BQ9H9Y6 1135 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 CLK4Q9HAZ1 481 aaKnown RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 MLXIPLQ9NP71 852 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 HAO1Q9UJM8 370 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 ZNF490Q9ULM2 529 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-219ENST00000629151 SRPK3Q9UPE1 567 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 SH2B3Q9UQQ2 575 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 KLHL20Q9Y2M5 609 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 RNF11Q9Y3C5 154 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 RAP2CQ9Y3L5 183 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 TRAF6Q9Y4K3 522 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 PCDHB3Q9Y5E6 796 aa11.04□□□□□ -0.64
PTPN7-219ENST00000629151 TMEM150CB9EJG8 249 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 AZIN1O14977 448 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CASC3O15234 703 aaKnown RBP11.03□□□□□ -0.64
PTPN7-219ENST00000629151 NVLO15381 856 aaKnown RBP11.03□□□□□ -0.64
PTPN7-219ENST00000629151 LCMT2O60294 686 aaKnown RBP11.03□□□□□ -0.64
PTPN7-219ENST00000629151 PRAMEF4O60810 478 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 OR4F21O95013 312 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CAPN1P07384 714 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 BGNP21810 368 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CD82P27701 267 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 BCL6P41182 706 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 RPL14P50914 215 aaKnown RBP11.03□□□□□ -0.64
PTPN7-219ENST00000629151 BST1Q10588 318 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 FAM53BQ14153 422 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 MUM1Q2TAK8 710 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 WASHC2DQ5SRD0 308 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms