RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CFAP20Q9Y6A4 193 aaKnown RBP13.64□□□□□ -0.23
LDB3-209ENST00000623056 EFCAB10A6NFE3 127 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 F8W810 466 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 EPN2O95208 641 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 CR2P20023 1033 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 RPS19P39019 145 aaKnown RBP13.64□□□□□ -0.23
LDB3-209ENST00000623056 HTR2BP41595 481 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 TEKQ02763 1124 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 HYAL2Q12891 473 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 PTRHD1Q6GMV3 140 aaKnown RBP13.64□□□□□ -0.23
LDB3-209ENST00000623056 MBOAT1Q6ZNC8 495 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 ZNF621Q6ZSS3 439 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 C11orf74Q86VG3 221 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 DEPDC4Q8N2C3 294 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 DENND6BQ8NEG7 585 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 C9orf43Q8TAL5 461 aaPredicted RBP13.64□□□□□ -0.23
LDB3-209ENST00000623056 UTP15Q8TED0 518 aaKnown RBP13.64□□□□□ -0.23
LDB3-209ENST00000623056 UBTD2Q8WUN7 234 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 SELENOMQ8WWX9 145 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 CNPPD1Q9BV87 410 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 BBS2Q9BXC9 721 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 SRRQ9GZT4 340 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 TIGARQ9NQ88 270 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 UBA2Q9UBT2 640 aaPredicted RBP13.64□□□□□ -0.23
LDB3-209ENST00000623056 PCDHB1Q9Y5F3 818 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 RAI2Q9Y5P3 530 aa13.64□□□□□ -0.23
LDB3-209ENST00000623056 LOC105371267A0A1B0GV96 52 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 ANKRD66B4E2M5 251 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 H7C0S8 307 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 TNFRSF11BO00300 401 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 CLDN9O95484 217 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 PRIM2P49643 509 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 RGS4P49798 205 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 CD83Q01151 205 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 PPIGQ13427 754 aaKnown RBP eCLIP13.63□□□□□ -0.23
LDB3-209ENST00000623056 DMC1Q14565 340 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 FAM214AQ32MH5 1076 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 MSANTD1Q6ZTZ1 278 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 TSEN54Q7Z6J9 526 aaKnown RBP13.63□□□□□ -0.23
LDB3-209ENST00000623056 LAX1Q8IWV1 398 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 SIX5Q8N196 739 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 CPA6Q8N4T0 437 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 OR10G2Q8NGC3 310 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 TINF2Q9BSI4 451 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 SPON2Q9BUD6 331 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 CDCA4Q9BXL8 241 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 ASPNQ9BXN1 380 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 TLR8Q9NR97 1041 aaKnown RBP13.63□□□□□ -0.23
LDB3-209ENST00000623056 ABCB8Q9NUT2 735 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 SLC6A14Q9UN76 642 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 DUSP12Q9UNI6 340 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 A0A0X1KG70 313 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 C17orf102A2RUQ5 167 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 MAGEB17A8MXT2 336 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 SCAMP3O14828 347 aaKnown RBP13.63□□□□□ -0.23
LDB3-209ENST00000623056 ARHGEF15O94989 841 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 ENDOUP21128 410 aaKnown RBP13.63□□□□□ -0.23
LDB3-209ENST00000623056 CACNG1Q06432 222 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 MTAPQ13126 283 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 GPR155Q7Z3F1 870 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 GPR142Q7Z601 462 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 ELMOD2Q8IZ81 293 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 SYNPOQ8N3V7 929 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 GPR152Q8TDT2 470 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 COQ8BQ96D53 544 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 APIPQ96GX9 242 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 TAPBPLQ9BX59 468 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 GON7Q9BXV9 100 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 SLC22A4Q9H015 551 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 EXOSC4Q9NPD3 245 aaKnown RBP13.63□□□□□ -0.23
LDB3-209ENST00000623056 IMPAD1Q9NX62 359 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 MARCH2Q9P0N8 246 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 PADI2Q9Y2J8 665 aa13.63□□□□□ -0.23
LDB3-209ENST00000623056 PLXNA4Q9HCM2 1894 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 CCDC182A6NF36 153 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 ZSCAN5BA6NJL1 495 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 H3BM21 787 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 SUV39H1O43463 412 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 NBNO60934 754 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 CPNE3O75131 537 aaKnown RBP13.62□□□□□ -0.23
LDB3-209ENST00000623056 STK16O75716 305 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 CPSF4O95639 269 aaKnown RBP13.62□□□□□ -0.23
LDB3-209ENST00000623056 NUDT7P0C024 238 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 TACR2P21452 398 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 AQP1P29972 269 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 ABRQ12979 859 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 VEZF1Q14119 521 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 C10orf120Q5SQS8 335 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 PRAMEF19Q5SWL8 479 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 CST9Q5W186 159 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 KRT73Q86Y46 540 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 PEX5LQ8IYB4 626 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 CACTIN-AS1Q8N1I8 211 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 APOLD1Q96LR9 279 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms