RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MRPS30Q9NP92 439 aaKnown RBP20.61■□□□□ 0.89
SPAST-204ENST00000621856 GPR27Q9NS67 375 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 STOML1Q9UBI4 398 aa20.61■□□□□ 0.89
SPAST-204ENST00000621856 FEZF1A0PJY2 475 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 C19orf67A6NJJ6 358 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 METTL12A8MUP2 240 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 CTSEP14091 401 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 ANPEPP15144 967 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 CD27P26842 260 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 SLC19A1P41440 591 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 CYP4F2P78329 520 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 TRAP1Q12931 704 aaKnown RBP20.6■□□□□ 0.89
SPAST-204ENST00000621856 MTAPQ13126 283 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 RABL3Q5HYI8 236 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 NANOGP8Q6NSW7 305 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 VN1R5Q7Z5H4 357 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 AMIGO1Q86WK6 493 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 KIAA2013Q8IYS2 634 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 OR4E2Q8NGC2 313 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 OR4K1Q8NGD4 311 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 GPBAR1Q8TDU6 330 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 GTF2H4Q92759 462 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 TMEM74Q96NL1 305 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 CGREF1Q99674 301 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 PITHD1Q9GZP4 211 aaPredicted RBP20.6■□□□□ 0.89
SPAST-204ENST00000621856 RHBGQ9H310 441 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 NT5DC2Q9H857 520 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 RMND5AQ9H871 391 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 NANOGQ9H9S0 305 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 GMPR2Q9P2T1 348 aaKnown RBP20.6■□□□□ 0.89
SPAST-204ENST00000621856 SLCO1B1Q9Y6L6 691 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 PLXND1Q9Y4D7 1925 aa20.6■□□□□ 0.89
SPAST-204ENST00000621856 OR1F1O43749 312 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 CCNDBP1O95273 360 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 SERPINB1P30740 379 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 CSNK1G2P78368 415 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 ABATP80404 500 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 PRRT3Q5FWE3 981 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 ARMCX6Q7L4S7 300 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 COMMD6Q7Z4G1 85 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 SPATA24Q86W54 205 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 CAMKK1Q8N5S9 505 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 STARD8Q92502 1023 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 PCED1AQ9H1Q7 454 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 TAAR2Q9P1P5 351 aa20.59■□□□□ 0.89
SPAST-204ENST00000621856 ISM1B1AKI9 464 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 HSD17B1P14061 328 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 COX7A2P14406 83 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 CMPK1P30085 196 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 PEBP1P30086 187 aaKnown RBP20.58■□□□□ 0.89
SPAST-204ENST00000621856 RPL6Q02878 288 aaKnown RBP20.58■□□□□ 0.89
SPAST-204ENST00000621856 PLCL1Q15111 1095 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 DPY19L1Q2PZI1 675 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 HKDC1Q2TB90 917 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 SPATS1Q496A3 300 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 TAF8Q7Z7C8 310 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 GPR180Q86V85 440 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 PARGQ86W56 976 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 FAM20CQ8IXL6 584 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 METTL4Q8N3J2 472 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 ANKRD53Q8N9V6 530 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 RSRC1Q96IZ7 334 aaKnown RBP20.58■□□□□ 0.89
SPAST-204ENST00000621856 ITCHQ96J02 903 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 SRMSQ9H3Y6 488 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 SPHK1Q9NYA1 384 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 OR6C2Q9NZP2 312 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.58■□□□□ 0.89
SPAST-204ENST00000621856 KLF15Q9UIH9 416 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 MAPRE3Q9UPY8 281 aa20.58■□□□□ 0.89
SPAST-204ENST00000621856 PRICKLE3O43900 615 aaPredicted RBP20.58■□□□□ 0.88
SPAST-204ENST00000621856 DCNP07585 359 aaKnown RBP20.58■□□□□ 0.88
SPAST-204ENST00000621856 CHRM5P08912 532 aaPredicted RBP20.58■□□□□ 0.88
SPAST-204ENST00000621856 HPCAL1P37235 193 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 KIR3DL1P43629 444 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 BLKP51451 505 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 EEFSECP57772 596 aaKnown RBP20.58■□□□□ 0.88
SPAST-204ENST00000621856 LIPEQ05469 1076 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 SRSF11Q05519 484 aaKnown RBP20.58■□□□□ 0.88
SPAST-204ENST00000621856 BNIP2Q12982 314 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 GALNT18Q6P9A2 607 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 DNAJC14Q6Y2X3 702 aaPredicted RBP20.58■□□□□ 0.88
SPAST-204ENST00000621856 DCP2Q8IU60 420 aaKnown RBP20.58■□□□□ 0.88
SPAST-204ENST00000621856 CADM4Q8NFZ8 388 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 OR7A2PQ8NGA2 310 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 WDR48Q8TAF3 677 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 SPACA7Q96KW9 195 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 SLC6A20Q9NP91 592 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 SIRT5Q9NXA8 310 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 AHSPQ9NZD4 102 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 SIT1Q9Y3P8 196 aa20.58■□□□□ 0.88
SPAST-204ENST00000621856 CROCCQ5TZA2 2017 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 HEATR5BQ9P2D3 2071 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 DFNA5O60443 496 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 VIPP01282 170 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 CELA2BP08218 269 aaPredicted RBP20.57■□□□□ 0.88
SPAST-204ENST00000621856 GRK3P35626 688 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 RPS9P46781 194 aaKnown RBP20.57■□□□□ 0.88
SPAST-204ENST00000621856 CXCL12P48061 93 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 PTDSS1P48651 473 aaKnown RBP20.57■□□□□ 0.88
SPAST-204ENST00000621856 GSK3BP49841 420 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms