RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TSC22D4Q9Y3Q8 395 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PRAMEF33A0A0G2JMD5 474 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PRSS51A0A1B0GVH4 220 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 ANHXE9PGG2 379 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 H7BY64 318 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 IDSP22304 550 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 CDKN2CP42773 168 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 MRPL19P49406 292 aaKnown RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 PHEXP78562 749 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 RPA4Q13156 261 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 COL9A2Q14055 689 aaPredicted RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 SMU1Q2TAY7 513 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 XKR5Q6UX68 686 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 TMEM92Q6UXU6 159 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 DPP10Q8N608 796 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 OR5K2Q8NHB8 316 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 FAM3CQ92520 227 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 SLCO4A1Q96BD0 722 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 MRGPRX1Q96LB2 322 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 PRAP1Q96NZ9 151 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 INSM2Q96T92 566 aaPredicted RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 SORBS1Q9BX66 1292 aaKnown RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 C1QTNF2Q9BXJ5 285 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 TTYH1Q9H313 450 aaPredicted RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 IKZF5Q9H5V7 419 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 SLC6A13Q9NSD5 602 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 CUEDC1Q9NWM3 386 aaPredicted RBP9.57□□□□□ -0.88
VTA1-205ENST00000620996 PCDHB14Q9Y5E9 798 aa9.57□□□□□ -0.88
VTA1-205ENST00000620996 TRIOBPQ9H2D6 2365 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 TCRBV3S1A0A5B6 114 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 TMEM247A6NEH6 219 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 FPGTO14772 594 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 MED21Q13503 144 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 RASGRP3Q8IV61 690 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 SMYD1Q8NB12 490 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 TSACCQ96A04 125 aaPredicted RBP9.56□□□□□ -0.88
VTA1-205ENST00000620996 CENPKQ9BS16 269 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 FGF22Q9HCT0 170 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 ANKDD1BA6NHY2 528 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 RASGRP1O95267 797 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 CEACAM5P06731 702 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 KLK1P06870 262 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 CKMT2P17540 419 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 PRPS1L1P21108 318 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 AK4P27144 223 aaPredicted RBP9.56□□□□□ -0.88
VTA1-205ENST00000620996 PHC1P78364 1004 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 CPTPQ5TA50 214 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 OGFRL1Q5TC84 451 aaPredicted RBP9.56□□□□□ -0.88
VTA1-205ENST00000620996 ATG9BQ674R7 924 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 TMIGD1Q6UXZ0 262 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 CLECL1Q8IZS7 167 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 KRT78Q8N1N4 520 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 WDR48Q8TAF3 677 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 VPS50Q96JG6 964 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 CNBD2Q96M20 576 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 SGPP1Q9BX95 441 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 BTBD1Q9H0C5 482 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 C8orf33Q9H7E9 229 aaPredicted RBP9.56□□□□□ -0.88
VTA1-205ENST00000620996 SPATA6Q9NWH7 488 aaPredicted RBP9.56□□□□□ -0.88
VTA1-205ENST00000620996 SLC25A37Q9NYZ2 338 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 ANAPC2Q9UJX6 822 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 DOLKQ9UPQ8 538 aa9.56□□□□□ -0.88
VTA1-205ENST00000620996 RBMX2Q9Y388 322 aaKnown RBP9.56□□□□□ -0.88
VTA1-205ENST00000620996 GOLGA4Q13439 2230 aaKnown RBP9.55□□□□□ -0.88
VTA1-205ENST00000620996 A0A0G2JN53 185 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 A0A0J9YVX5 310 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 NPPAP01160 153 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 NTRK1P04629 796 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 LAMP1P11279 417 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 HPCAL1P37235 193 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 CASP9P55211 416 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 FOLH1Q04609 750 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 C6orf52Q5T4I8 152 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 Q6ZS52 159 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 CLEC4FQ8N1N0 589 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 DTWD1Q8N5C7 304 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 FBXO15Q8NCQ5 510 aaPredicted RBP9.55□□□□□ -0.88
VTA1-205ENST00000620996 CATSPER1Q8NEC5 780 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 PDXPQ96GD0 296 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 GAS2L1Q99501 681 aaPredicted RBP9.55□□□□□ -0.88
VTA1-205ENST00000620996 SH3GL1Q99961 368 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 HAUS8Q9BT25 410 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 RPF2Q9H7B2 306 aaKnown RBP9.55□□□□□ -0.88
VTA1-205ENST00000620996 COQ10BQ9H8M1 238 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 DMRT3Q9NQL9 472 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 ASIC5Q9NY37 505 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 ACSL5Q9ULC5 683 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 RNF103-CHMP3A0A140T963 221 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 AQP12BA6NM10 295 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 RTCAO00442 366 aaKnown RBP9.55□□□□□ -0.88
VTA1-205ENST00000620996 TRIM23P36406 574 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 TPMTP51580 245 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 SPIN4Q56A73 249 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 EOGTQ5NDL2 527 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 LCN8Q6JVE9 175 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 FAM180BQ6P0A1 224 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 RNF165Q6ZSG1 346 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 COMMD6Q7Z4G1 85 aa9.55□□□□□ -0.88
VTA1-205ENST00000620996 ZNF554Q86TJ5 538 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms