RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DSG4Q86SJ6 1040 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GTF2IRD2Q86UP8 949 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PHYKPLQ8IUZ5 450 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 LIX1Q8N485 282 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 DCAF4L2Q8NA75 395 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF707Q96C28 371 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ITCHQ96J02 903 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF641Q96N77 438 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ROGDIQ9GZN7 287 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 MMP27Q9H306 513 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GORASP2Q9H8Y8 452 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 SP140LQ9H930 580 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PDFQ9HBH1 243 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 LRTM1Q9HBL6 345 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 IKZF3Q9UKT9 509 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 WBP11Q9Y2W2 641 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CHD7Q9P2D1 2997 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PATJQ8NI35 1801 aa6.77□□□□□ -1.32
SRGAP3-213ENST00000618999 PRSS47A8MTI9 375 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ARNTLO00327 626 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 LDB2O43679 373 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ITGB6P18564 788 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 RYKP34925 604 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 NNMTP40261 264 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 RECQLP46063 649 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 RUNX1T1Q06455 604 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 CAMK2GQ13555 558 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 DUSP6Q16828 381 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF181Q2M3W8 571 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 SPANXN4Q5MJ08 99 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 USP43Q70EL4 1123 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 OR52B6Q8NGF0 335 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PHF10Q8WUB8 498 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 USP7Q93009 1102 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 FATE1Q969F0 183 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC35B4Q969S0 331 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PYURFQ96I23 114 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ZFYVE19Q96K21 471 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 CSF3RQ99062 836 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PSD2Q9BQI7 771 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 COPS4Q9BT78 406 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ITPAQ9BY32 194 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 TRIT1Q9H3H1 467 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ELOVL6Q9H5J4 265 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 SFXN1Q9H9B4 322 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF556Q9HAH1 456 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 AKIP1Q9NQ31 210 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 SPHK2Q9NRA0 654 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 EHD3Q9NZN3 535 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PLXNA3P51805 1871 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 MROH6A6NGR9 719 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 CENPXA8MT69 81 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 M0QX08 132 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 RFXANKO14593 260 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 SMAD6O43541 496 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 IDH2P48735 452 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 HSPA7P48741 367 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 GP2P55259 537 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ARHGEF7Q14155 803 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 TIMM50Q3ZCQ8 353 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PYCR3Q53H96 274 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ARMCX4Q5H9R4 360 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 TPRG1LQ5T0D9 272 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 MPP7Q5T2T1 576 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 OR2T5Q6IEZ7 315 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ZCCHC8Q6NZY4 707 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 DCP2Q8IU60 420 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 RIMKLAQ8IXN7 391 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 GJD3Q8N144 294 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 CELF5Q8N6W0 485 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 OR4F6Q8NGB9 312 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 OR10Q1Q8NGQ4 319 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 GPR150Q8NGU9 434 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 OR2T29Q8NH02 315 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 FIBINQ8TAL6 211 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 EEF1AKMT1Q8WVE0 214 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 MGME1Q9BQP7 344 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 AMBRA1Q9C0C7 1298 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 LMAN2LQ9H0V9 348 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 NTN4Q9HB63 628 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 BPIFA1Q9NP55 256 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 VAPAQ9P0L0 249 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC25A13Q9UJS0 675 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 RABL2BQ9UNT1 228 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 hCG_2039718K7EN88 272 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 DYRK3O43781 588 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 NUAK1O60285 661 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ERN1O75460 977 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 UPK1BO75841 260 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 FABP3P05413 133 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 MMP2P08253 660 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ACPPP15309 386 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 CTSKP43235 329 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 STK19P49842 368 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 NKX2-5P52952 324 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 MLLT10P55197 1068 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 CSNK2BP67870 215 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 BCL2L1Q07817 233 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms