RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MEF2AQ02078 507 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 RELAQ04206 551 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 BMPR2Q13873 1038 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 CSHL1Q14406 222 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 UAP1Q16222 522 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 NKG7Q16617 165 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 LACTB2Q53H82 288 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 PRMT9Q6P2P2 845 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 RAPH1Q70E73 1250 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 VN1R4Q7Z5H5 301 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 APLFQ8IW19 511 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 SPSB2Q99619 263 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 ING2Q9H160 280 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 CDC42EP4Q9H3Q1 356 aaKnown RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 SOX17Q9H6I2 414 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 WDR54Q9H977 334 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 ZNF304Q9HCX3 659 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 TP53TG5Q9Y2B4 290 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 DYRK1BQ9Y463 629 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 TNRC6AQ8NDV7 1962 aaKnown RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 A1L4Q6 167 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 TXNDC9O14530 226 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 ACSL3O95573 720 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 ALBP02768 609 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 CD1DP15813 335 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 GMPRP36959 345 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 BCL6P41182 706 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 CCR8P51685 355 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 EMP3P54852 163 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 GARNL3Q5VVW2 1013 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 SHISA6Q6ZSJ9 500 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 OVCH1Q7RTY7 1134 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 TMPRSS11BQ86T26 416 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 SLC5A11Q8WWX8 675 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 EXT2Q93063 718 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 PTERQ96BW5 349 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 DRC3Q9H069 523 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 SLC26A1Q9H2B4 701 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 NXT1Q9UKK6 140 aaKnown RBP15.21■□□□□ 0.03
BRCA1-228ENST00000618469 UNC79Q9P2D8 2635 aa15.21■□□□□ 0.03
BRCA1-228ENST00000618469 TEP1Q99973 2627 aaKnown RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 A0A0A6YYC8 382 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 I3L1I5 382 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 FFAR3O14843 346 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 GPR42O15529 346 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 PRPF4O43172 522 aaKnown RBP eCLIP15.2■□□□□ 0.025e-17■■■■■ 29.7
BRCA1-228ENST00000618469 WDR47O94967 919 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 AGFG2O95081 481 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 ONECUT2O95948 504 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 SLC35E2BP0CK96 405 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 RNF224P0DH78 156 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 HNMTP50135 292 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 RRADP55042 308 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 ATP6V0D1P61421 351 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 DSG2Q14126 1118 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 SSPNQ14714 243 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 TGFBIQ15582 683 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 OR4D1Q15615 310 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 NDUFA9Q16795 377 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 C18orf21Q32NC0 220 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 CATSPEREQ5SY80 951 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 PPP1R32Q7Z5V6 425 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 THOC6Q86W42 341 aaKnown RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 RELL1Q8IUW5 271 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 PRSS58Q8IYP2 241 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 ARHGEF39Q8N4T4 335 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 ABHD11Q8NFV4 315 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 ZCCHC10Q8TBK6 192 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 NEIL2Q969S2 332 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 THAP11Q96EK4 314 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 MVB12AQ96EY5 273 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 MMABQ96EY8 250 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 CYTH2Q99418 400 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 MACROD1Q9BQ69 325 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 TSPYL1Q9H0U9 437 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 ACSS3Q9H6R3 686 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 WWOXQ9NZC7 414 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 ZNF282Q9UDV7 671 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 CDC14AQ9UNH5 594 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 SLC22A14Q9Y267 594 aa15.2■□□□□ 0.02
BRCA1-228ENST00000618469 MRPS2Q9Y399 296 aaKnown RBP15.2■□□□□ 0.02
BRCA1-228ENST00000618469 KCNE1BA0A087WTH5 132 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 PEX12O00623 359 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 SLC35G6P0C7Q6 338 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 GNLYP22749 145 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 CCL11P51671 97 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 OCA2Q04671 838 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 MROH9Q5TGP6 573 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 MED25Q71SY5 747 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 TBC1D1Q86TI0 1168 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-228ENST00000618469 ASPGQ86U10 573 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 ATCAYQ86WG3 371 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 GPSM1Q86YR5 675 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 TMEM102Q8N9M5 508 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-228ENST00000618469 MFSD9Q8NBP5 474 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 STT3BQ8TCJ2 826 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 MIEF2Q96C03 454 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 RHBDF1Q96CC6 855 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 UBXN10Q96LJ8 280 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 IP6K3Q96PC2 410 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms