RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SCN2BO60939 215 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 LYNP07948 512 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 ACADMP11310 421 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 ASMTP46597 345 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 POLE2P56282 527 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 PRKCQQ04759 706 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 TMEM31Q5JXX7 168 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 C6orf52Q5T4I8 152 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 C10orf62Q5T681 223 aaPredicted RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 TMIGD1Q6UXZ0 262 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 VN1R5Q7Z5H4 357 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 CLECL1Q8IZS7 167 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 PAPD5Q8NDF8 572 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 OR8J2Q8NGG1 315 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 WDR48Q8TAF3 677 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 CENPKQ9BS16 269 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 RMI1Q9H9A7 625 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 RAB26Q9ULW5 256 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 CA5BQ9Y2D0 317 aa16.68■□□□□ 0.26
PCDHGC3-205ENST00000617641 C7orf72A4D263 438 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 GABRR3A8MPY1 467 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 GMNNO75496 209 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 PIM1P11309 404 aaPredicted RBP16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 NDUFV2P19404 249 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 SLC14A1Q13336 389 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 CLCA4Q14CN2 919 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 PDK3Q15120 406 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 RBBP5Q15291 538 aaKnown RBP16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 MICU2Q8IYU8 434 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 LINC01555Q8NAE3 123 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 FAM120BQ96EK7 910 aaKnown RBP16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 PANX1Q96RD7 426 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 FGF22Q9HCT0 170 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 SPATA7Q9P0W8 599 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 DLGAP2Q9P1A6 1054 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 ERVK-11Q9UQG0 969 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 A0A1W2PPV9 198 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 SOCS2O14508 198 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 ASGR2P07307 311 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZCCHC18P0CG32 403 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 ACSL1P33121 698 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 HSD17B2P37059 387 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 PIK3CBP42338 1070 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 GZMMP51124 257 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 GALNT18Q6P9A2 607 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZBTB49Q6ZSB9 765 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 USP30Q70CQ3 517 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 CALHM3Q86XJ0 350 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 EPHX4Q8IUS5 362 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 SMPDL3AQ92484 453 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 UBE2E3Q969T4 207 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 RNF145Q96MT1 663 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 DUSP26Q9BV47 211 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 XKR8Q9H6D3 395 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 FAM120CQ9NX05 1096 aaKnown RBP16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 AP3M1Q9Y2T2 418 aa16.67■□□□□ 0.26
PCDHGC3-205ENST00000617641 OR52A4PA6NMU1 304 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 FAM220BPB1ANY3 271 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 DENRO43583 198 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 CPSF4O95639 269 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 CD72P21854 359 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 TRPC1P48995 793 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 CPTPQ5TA50 214 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 KRT78Q8N1N4 520 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 FAM86B1Q8N7N1 296 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 TNIP2Q8NFZ5 429 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 CENPNQ96H22 339 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 CAMK1GQ96NX5 476 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 Q9H521 79 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 GORASP2Q9H8Y8 452 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 ADGRE2Q9UHX3 823 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 SCOCQ9UIL1 159 aa16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 EXO1Q9UQ84 846 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 TNRC18O15417 2968 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-205ENST00000617641 PRR19A6NJB7 356 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PDZK1P1A8MUH7 402 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 H0Y8X5 98 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 CXCR6O00574 342 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 NARSO43776 548 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 SMNDC1O75940 238 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 FCGR1AP12314 374 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 HPCAL1P37235 193 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 HSPA13P48723 471 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 CCT8P50990 548 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 TFF2Q03403 129 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZNF763Q0D2J5 394 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 TCEA2Q15560 299 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZNF621Q6ZSS3 439 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZNF551Q7Z340 670 aaPredicted RBP16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 STARD8Q92502 1023 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZNF597Q96LX8 424 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 CHID1Q9BWS9 393 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 CARS2Q9HA77 564 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PRDM8Q9NQV8 689 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 NUP214P35658 2090 aaPredicted RBP16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PRAMEF33A0A0G2JMD5 474 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 ARHGAP10A1A4S6 786 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PDLIM1O00151 329 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 IDSP22304 550 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms