RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 RCVRNP35243 200 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 ARCN1P48444 511 aaKnown RBP8.61□□□□□ -1.03
PCDH15-229ENST00000616114 SEMG2Q02383 582 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 TLE2Q04725 743 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 LMAN2Q12907 356 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 RCAN2Q14206 197 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 PTGR1Q14914 329 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 PTGES3Q15185 160 aaKnown RBP8.61□□□□□ -1.03
PCDH15-229ENST00000616114 ZNF404Q494X3 552 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 REEP3Q6NUK4 255 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 DCUN1D3Q8IWE4 304 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 OR10G6Q8NH81 332 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 MOSPD2Q8NHP6 518 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 DOHHQ9BU89 302 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 HERC2P3Q9BVR0 1158 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 TPK1Q9H3S4 243 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 RDH14Q9HBH5 336 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 ZCCHC3Q9NUD5 404 aaKnown RBP8.61□□□□□ -1.03
PCDH15-229ENST00000616114 FBXW2Q9UKT8 454 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 GABRQQ9UN88 632 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 MYADML2A6NDP7 307 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 GTPBP1O00178 669 aaKnown RBP8.61□□□□□ -1.03
PCDH15-229ENST00000616114 TOR1BO14657 336 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 B3GALT2O43825 422 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 AOC2O75106 756 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 HOXD8P13378 290 aaPredicted RBP8.61□□□□□ -1.03
PCDH15-229ENST00000616114 HOXC13P31276 330 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 ZNF140P52738 457 aaPredicted RBP8.61□□□□□ -1.03
PCDH15-229ENST00000616114 SMSP52788 366 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 ERVPABLB-1P60509 514 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 ZNF789Q5FWF6 425 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 LRRC73Q5JTD7 316 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 CCDC80Q76M96 950 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 ADGRD2Q7Z7M1 963 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 FAM46DQ8NEK8 389 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 OR56A1Q8NGH5 318 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 SLC9A6Q92581 669 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 MOAP1Q96BY2 351 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 BHLHE41Q9C0J9 482 aaPredicted RBP8.61□□□□□ -1.03
PCDH15-229ENST00000616114 RIMS3Q9UJD0 308 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 RNF6Q9Y252 685 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 PTGDR2Q9Y5Y4 395 aa8.61□□□□□ -1.03
PCDH15-229ENST00000616114 TP73O15350 636 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 TYRP14679 529 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 GJA5P36382 358 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 SUOXP51687 545 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 SEMA3BQ13214 749 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 TPRG1LQ5T0D9 272 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 RTL4Q6ZR62 310 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 NRSN1Q8IZ57 195 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 FLCNQ8NFG4 579 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 CD200R1Q8TD46 325 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 SLC2A11Q9BYW1 496 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 BRINP2Q9C0B6 783 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 SOHLH2Q9NX45 425 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 INSL6Q9Y581 213 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 UGDHO60701 494 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 MTX2O75431 263 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 SAGP10523 405 aaPredicted RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 PRKACGP22612 351 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 ELK4P28324 431 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 TIA1P31483 386 aaKnown RBP eCLIP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 PGGT1BP53609 377 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 ERVK-21P61565 698 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 GK3PQ14409 553 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 ZNF805Q5CZA5 627 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 CRB2Q5IJ48 1285 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 MANEALQ5VSG8 457 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 ZNF367Q7RTV3 350 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 SETD7Q8WTS6 366 aaKnown RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 TRUB1Q8WWH5 349 aaKnown RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 DPF3Q92784 378 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 DNASE1L2Q92874 299 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 KCTD7Q96MP8 289 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 C20orf27Q9GZN8 174 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 WDR26Q9H7D7 661 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 NECTIN3Q9NQS3 549 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 KLHL33A6NCF5 533 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 SSNA1O43805 119 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 NT5EP21589 574 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 FAUP35544 74 aaKnown RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 TMEM115Q12893 351 aaPredicted RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 GANABQ14697 944 aaKnown RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 PDGFRLQ15198 375 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 MEDAGQ5VYS4 303 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 OTOP2Q7RTS6 562 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 KLHL36Q8N4N3 616 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 OR13J1Q8NGT2 312 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 OR14C36Q8NHC7 312 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 NCSTNQ92542 709 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 TP53INP1Q96A56 240 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 PDLIM5Q96HC4 596 aaKnown RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 RPRD1BQ9NQG5 326 aaKnown RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 MRPS7Q9Y2R9 242 aaKnown RBP8.6□□□□□ -1.03
PCDH15-229ENST00000616114 FABP12A6NFH5 140 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 ARHGEF33A8MVX0 844 aa8.6□□□□□ -1.03
PCDH15-229ENST00000616114 TBX1O43435 398 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms