RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 OR2T12Q8NG77 320 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 OR13H1Q8NG92 308 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 OR52E1Q8NGJ3 308 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 OR5K2Q8NHB8 316 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 DOK4Q8TEW6 326 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 MAL2Q969L2 176 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 BIRC7Q96CA5 298 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 FAM120BQ96EK7 910 aaKnown RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 LINC00615Q96LM1 132 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 CNBD2Q96M20 576 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ZNF583Q96ND8 569 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CAMK1GQ96NX5 476 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 GBP5Q96PP8 586 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 MIR1-1HGQ9H1L0 117 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SOX17Q9H6I2 414 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 ITM2CQ9NQX7 267 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 MRGBPQ9NV56 204 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 BCAP29Q9UHQ4 241 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 MCM8Q9UJA3 840 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 RIMS3Q9UJD0 308 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ACSL6Q9UKU0 697 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 U3KQV3 271 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CABIN1Q9Y6J0 2220 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ARHGEF17Q96PE2 2063 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 SPTBP11277 2137 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 RNF103-CHMP3A0A140T963 221 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PRSS51A0A1B0GVH4 220 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 H0YIV9 168 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PLXNA2O75051 1894 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 NME6O75414 186 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 DIRAS1O95057 198 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SEMA4FO95754 770 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ZNF682O95780 498 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CLIC3O95833 236 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 C9P02748 559 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PRPS2P11908 318 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ENGP17813 658 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PSMA4P25789 261 aaKnown RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 DGKEP52429 567 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 RAB8AP61006 207 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PLOD1Q02809 727 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 FOLH1Q04609 750 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 GRIK2Q13002 908 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CCINQ13939 588 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 LAPTM4AQ15012 233 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PLCL1Q15111 1095 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PCM1Q15154 2024 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PRSS53Q2L4Q9 553 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 GGTA1PQ4G0N0 100 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CYP27C1Q4G0S4 372 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ZNF385BQ569K4 471 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CPTPQ5TA50 214 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 KIAA1161Q6NSJ0 714 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 IYDQ6PHW0 289 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 HACD2Q6Y1H2 254 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ZNF852Q6ZMS4 543 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ZNF551Q7Z340 670 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 VN1R5Q7Z5H4 357 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SLC44A2Q8IWA5 706 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 LRRC56Q8IYG6 542 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 SHISA5Q8N114 240 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 TMEM132CQ8N3T6 1108 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 FBXL6Q8N531 539 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 FAM162AQ96A26 154 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 VPS50Q96JG6 964 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 MAGED4Q96JG8 741 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 NSMCE2Q96MF7 247 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 TRAPPC9Q96Q05 1148 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SGPP1Q9BX95 441 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SERHLQ9NQF3 203 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 DMRT3Q9NQL9 472 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 AASDHPPTQ9NRN7 309 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SPATA6Q9NWH7 488 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 DLGAP2Q9P1A6 1054 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ABCD2Q9UBJ2 740 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 RAPGEFL1Q9UHV5 662 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ADGRE2Q9UHX3 823 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 RUVBL1Q9Y265 456 aaKnown RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 SNX11Q9Y5W9 270 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SNX8Q9Y5X2 465 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SCN3AQ9NY46 2000 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 LRRC72A6NJI9 287 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 GMNNO75496 209 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SEC24DO94855 1032 aaPredicted RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 IL3P08700 152 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PRPS1L1P21108 318 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 IL10P22301 178 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 MAPK1P28482 360 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SLC7A1P30825 629 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 BMP8BP34820 402 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 SOAT1P35610 550 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 LRRC32Q14392 662 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 RPE65Q16518 533 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CYP2A13Q16696 494 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 PAGE2BQ5JRK9 111 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 EOGTQ5NDL2 527 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CCNYL2Q5T2Q4 361 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 ANKRD34AQ69YU3 496 aa3.3□□□□□ -1.88
LIG4-205ENST00000614526 CAPRIN2Q6IMN6 1127 aaKnown RBP3.3□□□□□ -1.88
LIG4-205ENST00000614526 TMEM214Q6NUQ4 689 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms