RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ERVK-11Q9UQG0 969 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 NOTCH4Q99466 2003 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PNMA8CA0A1B0GUJ8 204 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ANKRD34BA5PLL1 514 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PDZK1P1A8MUH7 402 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 LOC730098B7Z3J9 87 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FAM47E-STBD1D6RA91 191 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 M0R129 80 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TRIM16O95361 564 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ANGPTL1O95841 491 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 INHBBP09529 407 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 HNRNPA1P09651 372 aaKnown RBP eCLIP10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 RPS3AP61247 264 aaKnown RBP10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZXDCQ2QGD7 858 aaPredicted RBP10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GTDC1Q4AE62 458 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 C6orf141Q5SZD1 244 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 HENMT1Q5T8I9 393 aaKnown RBP10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DPPA4Q7L190 304 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CAMKMTQ7Z624 323 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TECPR1Q7Z6L1 1165 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GPR149Q86SP6 731 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SVOPLQ8N434 492 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 BEND7Q8N7W2 519 aaPredicted RBP10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZNF420Q8TAQ5 688 aaPredicted RBP10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SPATA9Q9BWV2 254 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZBTB20Q9HC78 741 aaPredicted RBP10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SERHLQ9NQF3 203 aa10.51□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 hCG_2039718K7EN88 272 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 NRG2O14511 850 aaPredicted RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SCAMP3O14828 347 aaKnown RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FAM20BO75063 409 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PRKD3O94806 890 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PGRP06401 933 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CTSOP43234 321 aaPredicted RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CCDC85BQ15834 202 aaPredicted RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DGUOKQ16854 277 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 UAP1L1Q3KQV9 507 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZNF648Q5T619 568 aaPredicted RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 XAF1Q6GPH4 301 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DTWD1Q8N5C7 304 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CLDN19Q8N6F1 224 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 UBASH3BQ8TF42 649 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 TUBA1CQ9BQE3 449 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZSCAN5AQ9BUG6 496 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 RUBCNLQ9H714 662 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 KAT8Q9H7Z6 458 aaKnown RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 BRF2Q9HAW0 419 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SPHK2Q9NRA0 654 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FAM8A1Q9UBU6 413 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ADGRE2Q9UHX3 823 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 POLR3HQ9Y535 204 aaPredicted RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ORC6Q9Y5N6 252 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 WNT9AO14904 365 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 JUPP14923 745 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PTPN2P17706 415 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DAG1Q14118 895 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 NPTX1Q15818 432 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ZC3H12BQ5HYM0 836 aaKnown RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 Q6ZPB1 254 aaPredicted RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DPY19L3Q6ZPD9 716 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PLEKHG7Q6ZR37 379 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 NECAB2Q7Z6G3 386 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ADGRG2Q8IZP9 1017 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 AUTS2Q8WXX7 1259 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 WDR34Q96EX3 536 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DEPDC7Q96QD5 511 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DOK1Q99704 481 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ACPTQ9BZG2 426 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 IL23AQ9NPF7 189 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ERVK13-1Q9NX77 482 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 GPRC5BQ9NZH0 403 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 KIAA1549LQ6ZVL6 1849 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CYP2A7P20853 494 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CRHBPP24387 322 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 AQP1P29972 269 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 MAGEA2P43356 314 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ALDH3A2P51648 485 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 PNLIPRP1P54315 467 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FAM98BQ52LJ0 330 aaKnown RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CYP2U1Q7Z449 544 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 P2RY8Q86VZ1 359 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 MRPL43Q8N983 215 aaKnown RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CEP19Q96LK0 163 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CPPED1Q9BRF8 314 aaPredicted RBP10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CHCHD6Q9BRQ6 235 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 DPY30Q9C005 99 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SLC25A37Q9NYZ2 338 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ERVW-1Q9UQF0 538 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ANGPTL3Q9Y5C1 460 aa10.5□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 H0YIV9 168 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 LRATO95237 230 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 FKBP9O95302 570 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CXCL14O95715 111 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 B3GALT4O96024 378 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 BCKDHAP12694 445 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 SLC2A4P14672 509 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 JUNBP17275 347 aaPredicted RBP10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 CCR2P41597 374 aa10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
SENP3-EIF4A1-201ENST00000614237 EMX1Q04741 257 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms