RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TICAM1Q8IUC6 712 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 NAT8LQ8N9F0 302 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 OR9A4Q8NGU2 314 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 THAP11Q96EK4 314 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 PBKQ96KB5 322 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 CCDC138Q96M89 665 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 FAM167BQ9BTA0 163 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 VN1R1Q9GZP7 353 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 PPP2R2CQ9Y2T4 447 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 SCN2AQ99250 2005 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 MYO7BQ6PIF6 2116 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 ZG16O60844 167 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 STATHP02808 62 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 CSNK1G2P78368 415 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 ABHD17BQ5VST6 288 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 C1QL3Q5VWW1 255 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 TMEM214Q6NUQ4 689 aaKnown RBP16.81■□□□□ 0.28
SSBP1-215ENST00000612337 UGT3A1Q6NUS8 523 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 FJX1Q86VR8 437 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSBP1-215ENST00000612337 MCOLN3Q8TDD5 553 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 RELTQ969Z4 430 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 MS4A14Q96JA4 679 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 CYTH2Q99418 400 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 NAP1L3Q99457 506 aaPredicted RBP16.81■□□□□ 0.28
SSBP1-215ENST00000612337 C19orf25Q9UFG5 118 aaPredicted RBP16.81■□□□□ 0.28
SSBP1-215ENST00000612337 TEKT2Q9UIF3 430 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 TRMT6Q9UJA5 497 aaKnown RBP16.81■□□□□ 0.28
SSBP1-215ENST00000612337 JRKLQ9Y4A0 524 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 APCP25054 2843 aa16.81■□□□□ 0.28
SSBP1-215ENST00000612337 OR5H15A6NDH6 313 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 C8GP07360 202 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 MYBL2P10244 700 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 RGS4P49798 205 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 KCNK10P57789 538 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 TIAL1Q01085 375 aaKnown RBP eCLIP16.8■□□□□ 0.28
SSBP1-215ENST00000612337 SP140Q13342 867 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 PTK6Q13882 451 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 MINDY4Q4G0A6 757 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 PRSS41Q7RTY9 318 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 CPEB2Q7Z5Q1 589 aaKnown RBP16.8■□□□□ 0.28
SSBP1-215ENST00000612337 AMER2Q8N7J2 671 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 CAMKVQ8NCB2 501 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 OR51Q1Q8NH59 317 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 DNAJB8Q8NHS0 232 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 SUN3Q8TAQ9 357 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 TM4SF19Q96DZ7 209 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 IARS2Q9NSE4 1012 aaKnown RBP16.8■□□□□ 0.28
SSBP1-215ENST00000612337 STMN3Q9NZ72 180 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 ABI3Q9P2A4 366 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 ADAMTS6Q9UKP5 1117 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 ENTPD4Q9Y227 616 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 PDE10AQ9Y233 779 aa16.8■□□□□ 0.28
SSBP1-215ENST00000612337 SCN3AQ9NY46 2000 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 ENO4A6NNW6 628 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 SEC24DO94855 1032 aaPredicted RBP16.79■□□□□ 0.28
SSBP1-215ENST00000612337 RASAL1O95294 804 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 CRYABP02511 175 aaKnown RBP16.79■□□□□ 0.28
SSBP1-215ENST00000612337 IL1RNP18510 177 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 BCL6P41182 706 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 XCR1P46094 333 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 ZNF33BQ06732 778 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 MFSD4BQ5TF39 518 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 PLAG1Q6DJT9 500 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 AGTRAPQ6RW13 159 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 GFRALQ6UXV0 394 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 LANCL3Q6ZV70 420 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 PCGF5Q86SE9 256 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 C17orf64Q86WR6 236 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 PPIL6Q8IXY8 311 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 C2CD4AQ8NCU7 369 aaPredicted RBP16.79■□□□□ 0.28
SSBP1-215ENST00000612337 GRK7Q8WTQ7 553 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 EEF1AKMT1Q8WVE0 214 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 MACROD1Q9BQ69 325 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 FAM129AQ9BZQ8 928 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 PARVBQ9HBI1 364 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 TAS2R13Q9NYV9 303 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 HCN3Q9P1Z3 774 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 SH2B3Q9UQQ2 575 aa16.79■□□□□ 0.28
SSBP1-215ENST00000612337 IGHV3-20A0A0C4DH32 117 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 SGK494L7N484 410 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 PGRMC1O00264 195 aaKnown RBP16.78■□□□□ 0.28
SSBP1-215ENST00000612337 SLC16A5O15375 505 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 HNRNPRO43390 633 aaKnown RBP16.78■□□□□ 0.28
SSBP1-215ENST00000612337 NRDCO43847 1150 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 PRAMEF2O60811 474 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 PGAM1P18669 254 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 CCND1P24385 295 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 GRK3P35626 688 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 FNTAP49354 379 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 AGTR2P50052 363 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 CRYMQ14894 314 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 RNASEH2BQ5TBB1 312 aaKnown RBP16.78■□□□□ 0.28
SSBP1-215ENST00000612337 LCTLQ6UWM7 567 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 MBOAT1Q6ZNC8 495 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 ASPGQ86U10 573 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 PALM2Q8IXS6 379 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 SHISA5Q8N114 240 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 GABPB2Q8TAK5 448 aaPredicted RBP16.78■□□□□ 0.28
SSBP1-215ENST00000612337 NDNQ99608 321 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms